Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX3Q99909 NPIPB14P-203ENST00000532298 987 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 AC009729.1-201ENST00000548873 1133 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AC107958.1-201ENST00000556576 290 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.19□□□□□ -1.58
SSX3Q99909 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 FAM60CP-201ENST00000591086 664 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AL157899.1-201ENST00000604110 936 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 AL591926.1-201ENST00000620542 217 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 AP001052.1-201ENST00000626421 99 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 AC125238.2-201ENST00000430003 1440 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX3Q99909 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 SMG1P7-201ENST00000565246 2704 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX3Q99909 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 AC083843.2-201ENST00000568248 6253 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 RNU1-65P-201ENST00000363919 148 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 CXADRP1-201ENST00000398098 1095 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 AL121835.1-201ENST00000404250 354 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC099782.1-201ENST00000425889 474 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 EMC3-AS1-205ENST00000438698 534 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 RAB28P3-201ENST00000448325 597 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX3Q99909 RPL23AP64-201ENST00000469465 435 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 RPL7AP10-201ENST00000481016 791 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC108103.1-201ENST00000511286 446 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX3Q99909 AL078601.3-201ENST00000573303 535 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 MIR4271-201ENST00000582451 67 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC012213.4-201ENST00000606457 354 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 SNORA74.4-201ENST00000607595 199 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 CXADRP3-202ENST00000617265 1100 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 AC073592.6-201ENST00000624271 415 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX3Q99909 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 CASC19-246ENST00000641625 1606 ntBASIC5.18□□□□□ -1.58
SSX3Q99909 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX3Q99909 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX3Q99909 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX3Q99909 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SSX3Q99909 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms