Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 HIRAP1-201ENST00000605318 787 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 AC024941.1-201ENST00000612250 334 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 MIR6716-201ENST00000613413 80 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 AP004607.3-201ENST00000530354 3915 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 U3.22-201ENST00000391120 215 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 AL078599.1-201ENST00000402075 293 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 OR5M2P-202ENST00000641241 4242 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 RHOT1P3-201ENST00000436571 331 ntBASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 RNA5SP400-201ENST00000517155 111 ntBASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 uc_338.26-201ENST00000612659 160 ntBASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 AC092692.1-201ENST00000623625 2595 ntBASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.65□□□□□ -1.67
CSMD1Q96PZ7 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 OR7E122P-202ENST00000641144 6171 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AL359265.2-201ENST00000434367 631 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC021006.3-201ENST00000530771 192 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC011497.2-201ENST00000600255 639 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AL355974.3-201ENST00000617383 467 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC007938.2-201ENST00000604666 2634 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC009948.5-201ENST00000624360 4406 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 MBP-206ENST00000397863 4800 ntTSL 3 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 RPL32P23-201ENST00000397237 405 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 TMA16P2-201ENST00000413187 601 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 PTCD2P2-201ENST00000415579 1095 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 UBE2V1P14-201ENST00000415815 558 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 FAM96AP1-201ENST00000430879 482 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AP001781.1-201ENST00000530977 207 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC008147.3-201ENST00000548666 354 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC015799.1-201ENST00000622996 3122 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC009237.10-201ENST00000414112 510 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC009237.5-201ENST00000414271 501 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 RPL10P17-201ENST00000453852 316 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms