Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AL133243.2-201ENST00000610331 1621 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 GPS2P1-201ENST00000411761 986 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 TRGV5P-201ENST00000419915 354 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 ELOBP4-201ENST00000423418 296 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC099677.3-201ENST00000427081 395 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC234771.4-201ENST00000441416 730 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AL645936.1-201ENST00000441979 518 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 OR2L9P-201ENST00000444456 913 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AL929410.2-201ENST00000451170 189 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 RN7SL39P-201ENST00000462264 297 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 RN7SL346P-201ENST00000491561 294 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC135983.3-201ENST00000528049 1226 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 PSMC1P8-201ENST00000536820 1296 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC090022.1-201ENST00000546569 311 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC025283.1-201ENST00000572039 734 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC233702.9-201ENST00000581528 203 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC100832.2-201ENST00000582080 776 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 WBP1LP11-201ENST00000586141 328 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC036176.3-201ENST00000602456 418 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 AL008582.1-201ENST00000609612 442 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 MIR6503-201ENST00000622884 86 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 SAMMSON-227ENST00000642114 1199 ntBASIC4.32□□□□□ -1.72
AP1S3Q96PC3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
AP1S3Q96PC3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 SAMMSON-213ENST00000641336 1521 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 FANCD2P2-201ENST00000437591 1400 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 RN7SKP292-201ENST00000365522 317 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC087752.1-201ENST00000391360 558 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC003045.1-201ENST00000398779 713 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AL033519.1-201ENST00000407266 307 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC002524.1-201ENST00000411687 547 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 VN1R21P-201ENST00000426703 765 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC242426.1-201ENST00000435270 960 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 SDC4P-201ENST00000453285 601 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 RPL12P39-201ENST00000455456 496 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 EIF3LP2-201ENST00000457262 807 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC078899.1-201ENST00000521432 1185 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms