Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 RHOT1P3-201ENST00000436571 331 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 AC073648.4-201ENST00000442655 781 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 AC092647.2-201ENST00000452998 253 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 AC092905.1-201ENST00000467527 949 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 AC068522.1-201ENST00000482895 345 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 RAB9BP1-201ENST00000519581 626 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 AGGF1P7-201ENST00000562369 913 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 AC091193.1-201ENST00000604640 448 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 AP004607.3-201ENST00000530354 3915 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 AL034546.1-201ENST00000623740 3693 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 AP002991.2-201ENST00000623807 2801 ntBASIC9.28□□□□□ -0.92
TOPBP1Q92547 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC9.28□□□□□ -0.92
TOPBP1Q92547 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TOPBP1Q92547 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
TOPBP1Q92547 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TOPBP1Q92547 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
TOPBP1Q92547 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 RNU1-32P-201ENST00000363937 159 ntBASIC9.27□□□□□ -0.93
TOPBP1Q92547 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOPBP1Q92547 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 RNA5SP373-201ENST00000517271 95 ntBASIC9.27□□□□□ -0.93
TOPBP1Q92547 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 AC073869.10-201ENST00000642016 354 ntBASIC9.27□□□□□ -0.93
TOPBP1Q92547 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOPBP1Q92547 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
TOPBP1Q92547 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOPBP1Q92547 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOPBP1Q92547 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOPBP1Q92547 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TOPBP1Q92547 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 RNU1-146P-201ENST00000364015 165 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 YWHABP1-201ENST00000445359 727 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 C1GALT1P3-201ENST00000522049 819 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 AP002373.2-201ENST00000541631 1060 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 RN7SKP95-201ENST00000362860 303 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 CHMP1B2P-201ENST00000399581 597 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 COX6B1P1-201ENST00000415962 213 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC9.26□□□□□ -0.93
TOPBP1Q92547 GAPDHP25-201ENST00000447061 1001 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 AC007346.2-201ENST00000564816 892 ntBASIC9.26□□□□□ -0.93
TOPBP1Q92547 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TOPBP1Q92547 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 AL589993.1-201ENST00000407450 2524 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 CASC19-221ENST00000641309 1382 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms