Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 RNU1-46P-201ENST00000384425 164 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 HNRNPDP2-201ENST00000406475 478 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 RNA5SP155-201ENST00000411154 129 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 MTND4P24-201ENST00000424002 397 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 UBE2D3P3-201ENST00000426992 425 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 USP9YP28-201ENST00000435142 589 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 ELOCP11-201ENST00000436690 332 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 MSL3P1-202ENST00000440028 1468 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC007000.2-201ENST00000442564 487 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 ELOCP16-201ENST00000444494 332 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 RPL5P10-201ENST00000445207 894 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 CCNJP1-201ENST00000450600 1149 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC078857.1-201ENST00000469870 667 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 HMGB1P3-201ENST00000502802 616 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC083906.1-201ENST00000509298 406 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 UGT2A3P7-201ENST00000510485 734 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 HMGB1P46-201ENST00000520062 610 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 MTCO1P47-201ENST00000523889 1271 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 KCTD9P4-201ENST00000526766 1166 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC011500.1-201ENST00000601963 469 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC091057.2-201ENST00000602594 792 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC009501.3-201ENST00000605001 1352 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC135178.6-201ENST00000605314 398 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AP001264.1-201ENST00000620602 703 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 MRPL57P1-201ENST00000621486 265 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC090181.3-201ENST00000624777 1514 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 AC027575.3-201ENST00000583058 2747 ntBASIC6.12□□□□□ -1.43
SIMC1Q8NDZ2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 SPATA2P1-201ENST00000431223 2055 ntBASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AP002370.1-201ENST00000528055 1602 ntBASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AC010894.1-201ENST00000313760 361 ntBASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AL356057.1-202ENST00000402263 756 ntBASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 GAPDHP19-201ENST00000431768 1005 ntBASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.11□□□□□ -1.43
SIMC1Q8NDZ2 MTCYBP29-201ENST00000436327 1006 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms