Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC096921.1-201ENST00000411661 375 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 BX284632.2-201ENST00000421091 399 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC019205.1-201ENST00000421830 730 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC099670.2-201ENST00000435130 321 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 EIF5AP4-201ENST00000441206 465 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AL512605.1-202ENST00000441919 381 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AL359955.2-201ENST00000445380 353 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 GAPDHP71-201ENST00000511530 1003 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC111000.6-201ENST00000514471 709 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 GAPDHP62-201ENST00000515313 990 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 SCARNA18.1-201ENST00000516330 83 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC027369.2-201ENST00000528030 440 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC007956.1-201ENST00000555623 542 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC096996.1-201ENST00000563813 325 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC079315.1-201ENST00000602952 623 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS1Q01581 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS1Q01581 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 PDZK1P1-202ENST00000425209 1350 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AL355488.2-201ENST00000609909 2850 ntBASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS1Q01581 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS1Q01581 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS1Q01581 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS1Q01581 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS1Q01581 UGT2B24P-201ENST00000514441 1597 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AL161912.4-201ENST00000623889 2468 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC123769.1-201ENST00000530992 3192 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 RNA5SP453-201ENST00000362503 119 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 RNA5SP326-201ENST00000363209 110 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 RNA5SP500-201ENST00000364486 119 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 RAB5CP1-201ENST00000395972 580 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC115283.1-201ENST00000427353 400 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC126120.1-201ENST00000431082 470 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 VN1R110P-201ENST00000438988 971 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 SNORA81.2-201ENST00000516868 170 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC137627.1-201ENST00000545761 289 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC139697.1-201ENST00000548429 745 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AL356801.1-201ENST00000559320 294 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 LINC00556-201ENST00000569603 412 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 NANOGP3-201ENST00000605855 286 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC024884.1-201ENST00000620583 399 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGCS1Q01581 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AC068870.1-201ENST00000563737 2455 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 CASC19-260ENST00000641828 2001 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGCS1Q01581 AL078595.2-201ENST00000605309 1780 ntBASIC5.5□□□□□ -1.53
HMGCS1Q01581 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 AC026523.2-201ENST00000625039 7739 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 RNA5SP273-201ENST00000362484 113 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms