Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 TMSB4XP4-201ENST00000323496 618 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 RN7SKP78-201ENST00000364711 318 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 SNORA17A-201ENST00000391185 133 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AL121835.1-201ENST00000404250 354 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK3Q00526 ARL4AP4-201ENST00000434170 518 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AC023141.8-201ENST00000442554 208 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 NXT1P1-201ENST00000458481 316 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 AC104109.1-201ENST00000498563 436 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.79□□□□□ -1.48
CDK3Q00526 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 NENFP3-201ENST00000503735 313 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK3Q00526 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK3Q00526 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK3Q00526 IGLV3-30-201ENST00000524362 298 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 AC244502.2-201ENST00000543361 851 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CDK3Q00526 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 AC239803.2-201ENST00000610161 430 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 AL355974.3-201ENST00000617383 467 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 SNORA17.5-201ENST00000630429 132 ntBASIC5.79□□□□□ -1.48
CDK3Q00526 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK3Q00526 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK3Q00526 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDK3Q00526 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK3Q00526 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK3Q00526 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK3Q00526 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK3Q00526 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDK3Q00526 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDK3Q00526 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDK3Q00526 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDK3Q00526 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK3Q00526 AC127526.2-201ENST00000426436 775 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AL161636.2-201ENST00000445179 927 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK3Q00526 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.78□□□□□ -1.48
CDK3Q00526 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK3Q00526 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK3Q00526 AC115223.1-201ENST00000466377 870 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.78□□□□□ -1.48
CDK3Q00526 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.78□□□□□ -1.48
CDK3Q00526 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK3Q00526 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK3Q00526 MIR2117-201ENST00000516780 80 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK3Q00526 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK3Q00526 AP001496.3-201ENST00000580230 913 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK3Q00526 NPM1P45-201ENST00000583151 559 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK3Q00526 AC015802.2-201ENST00000589690 189 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AC078880.4-201ENST00000617627 1749 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK3Q00526 OR13C1P-202ENST00000641378 2919 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK3Q00526 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK3Q00526 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK3Q00526 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK3Q00526 AC005725.1-201ENST00000577346 2607 ntBASIC5.78□□□□□ -1.48
CDK3Q00526 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.48
CDK3Q00526 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CDK3Q00526 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 ZNF658B-201ENST00000602828 3408 ntBASIC5.77□□□□□ -1.49
CDK3Q00526 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK3Q00526 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK3Q00526 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.77□□□□□ -1.49
CDK3Q00526 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK3Q00526 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDK3Q00526 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDK3Q00526 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK3Q00526 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK3Q00526 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK3Q00526 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms