Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.65□□□□□ -1.51
CLDN6P56747 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
CLDN6P56747 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CLDN6P56747 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 AL161756.3-201ENST00000641216 2071 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN6P56747 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLDN6P56747 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.64□□□□□ -1.51
CLDN6P56747 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 RPS27P18-201ENST00000431701 247 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN6P56747 EEF1B2P5-201ENST00000444820 548 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AURKAPS1-201ENST00000451805 1212 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN6P56747 AC022215.1-201ENST00000481770 362 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN6P56747 GAPDHP71-201ENST00000511530 1003 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 OR4A46P-201ENST00000527255 933 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.64□□□□□ -1.51
CLDN6P56747 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 AP002884.5-201ENST00000595053 1132 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AL034374.2-201ENST00000605281 548 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AL137246.2-201ENST00000613439 662 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AP003789.1-201ENST00000617737 605 ntBASIC5.64□□□□□ -1.51
CLDN6P56747 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN6P56747 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN6P56747 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN6P56747 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN6P56747 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLDN6P56747 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 AC011369.2-201ENST00000624423 1567 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 AP004289.1-201ENST00000436307 2205 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 LINC01616-201ENST00000561816 2280 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN6P56747 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 AC005042.1-201ENST00000393397 800 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 MIR1286-201ENST00000408112 78 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 AC116036.1-201ENST00000412199 367 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 GABARAPL3-201ENST00000412799 354 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
CLDN6P56747 RPS4XP5-201ENST00000419038 768 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 RPL12P3-201ENST00000440080 396 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 AC005297.1-201ENST00000444765 862 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 AC112187.1-201ENST00000455837 479 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 RPL32P33-201ENST00000487023 394 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 RN7SL30P-201ENST00000488416 306 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 RPS23P1-201ENST00000491662 432 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN6P56747 RN7SKP248-201ENST00000516278 305 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 SCARNA6.1-201ENST00000516989 238 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 MRPS16P1-201ENST00000523462 412 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 AC037198.3-201ENST00000616754 526 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 AC136428.4-201ENST00000634254 1155 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 SAMMSON-227ENST00000642114 1199 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 CASC19-248ENST00000641674 1356 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 GTF2IP4-201ENST00000453092 2054 ntBASIC5.63□□□□□ -1.51
CLDN6P56747 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN6P56747 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN6P56747 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
CLDN6P56747 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN6P56747 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN6P56747 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLDN6P56747 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN6P56747 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN6P56747 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms