Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CXCL12P48061 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 AC008957.3-201ENST00000624112 2242 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CXCL12P48061 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CXCL12P48061 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CXCL12P48061 AL591135.1-201ENST00000401578 5914 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CXCL12P48061 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.76□□□□□ -1.49
CXCL12P48061 RNA5SP333-201ENST00000363466 118 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 U8.4-201ENST00000363626 134 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 RNA5SP334-201ENST00000364825 118 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CXCL12P48061 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CXCL12P48061 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CXCL12P48061 RNU1-77P-201ENST00000390868 162 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.76□□□□□ -1.49
CXCL12P48061 AC005033.1-201ENST00000428904 813 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.76□□□□□ -1.49
CXCL12P48061 VN1R54P-201ENST00000435210 1049 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.76□□□□□ -1.49
CXCL12P48061 AC011742.2-201ENST00000443818 352 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 FAR2P1-206ENST00000449736 709 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.76□□□□□ -1.49
CXCL12P48061 RN7SL860P-201ENST00000473738 223 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 RN7SL222P-201ENST00000476452 299 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 RN7SKP66-201ENST00000516681 231 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.76□□□□□ -1.49
CXCL12P48061 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CXCL12P48061 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.76□□□□□ -1.49
CXCL12P48061 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.76□□□□□ -1.49
CXCL12P48061 MIR4646-201ENST00000580775 63 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 AC104785.1-201ENST00000603220 588 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 PPATP2-201ENST00000605635 508 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 AL049539.1-201ENST00000611964 459 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 AC090607.5-201ENST00000615692 224 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CXCL12P48061 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CXCL12P48061 AP000641.1-201ENST00000531988 1639 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.76□□□□□ -1.49
CXCL12P48061 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CXCL12P48061 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CXCL12P48061 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CXCL12P48061 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.76□□□□□ -1.49
CXCL12P48061 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CXCL12P48061 ZNF733P-202ENST00000444809 1573 ntBASIC5.76□□□□□ -1.49
CXCL12P48061 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CXCL12P48061 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 AL161912.4-201ENST00000623889 2468 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 RPL23P2-201ENST00000320371 421 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.75□□□□□ -1.49
CXCL12P48061 RPA2P2-201ENST00000419698 796 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.75□□□□□ -1.49
CXCL12P48061 OR52B5P-201ENST00000435337 951 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.75□□□□□ -1.49
CXCL12P48061 AL603882.1-201ENST00000463059 681 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.75□□□□□ -1.49
CXCL12P48061 RN7SKP99-201ENST00000517028 307 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 OR5D15P-201ENST00000531671 942 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.75□□□□□ -1.49
CXCL12P48061 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.75□□□□□ -1.49
CXCL12P48061 OR4H6P-201ENST00000563771 921 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CXCL12P48061 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 AC087763.1-201ENST00000603391 286 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.75□□□□□ -1.49
CXCL12P48061 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 OR52B5P-202ENST00000641118 1110 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 AC107980.1-201ENST00000558671 3355 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 AC087516.1-201ENST00000561236 2428 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 AC023421.1-201ENST00000590535 1785 ntBASIC5.75□□□□□ -1.49
CXCL12P48061 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CXCL12P48061 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CXCL12P48061 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.74□□□□□ -1.49
CXCL12P48061 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.74□□□□□ -1.49
CXCL12P48061 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CXCL12P48061 AC007998.4-201ENST00000612496 2533 ntBASIC5.74□□□□□ -1.49
CXCL12P48061 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CXCL12P48061 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CXCL12P48061 RN7SKP103-201ENST00000363848 320 ntBASIC5.74□□□□□ -1.49
CXCL12P48061 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CXCL12P48061 GABARAPL3-201ENST00000412799 354 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms