Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OR5D15P-201ENST00000531671 942 ntBASIC6.83□□□□□ -1.32
COL1A1P02452 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.83□□□□□ -1.32
COL1A1P02452 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 MIR4311-201ENST00000580794 100 ntBASIC6.83□□□□□ -1.32
COL1A1P02452 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.82□□□□□ -1.32
COL1A1P02452 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.82□□□□□ -1.32
COL1A1P02452 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
COL1A1P02452 RNA5SP326-201ENST00000363209 110 ntBASIC6.82□□□□□ -1.32
COL1A1P02452 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.82□□□□□ -1.32
COL1A1P02452 RPL12P39-201ENST00000455456 496 ntBASIC6.82□□□□□ -1.32
COL1A1P02452 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.82□□□□□ -1.32
COL1A1P02452 RPEP1-201ENST00000504507 658 ntBASIC6.82□□□□□ -1.32
COL1A1P02452 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.82□□□□□ -1.32
COL1A1P02452 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.82□□□□□ -1.32
COL1A1P02452 AC010245.2-201ENST00000606908 1167 ntBASIC6.82□□□□□ -1.32
COL1A1P02452 AC079414.3-201ENST00000612986 1090 ntBASIC6.82□□□□□ -1.32
COL1A1P02452 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.82□□□□□ -1.32
COL1A1P02452 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.82□□□□□ -1.32
COL1A1P02452 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.82□□□□□ -1.32
COL1A1P02452 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL1A1P02452 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL1A1P02452 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.82□□□□□ -1.32
COL1A1P02452 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL1A1P02452 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL1A1P02452 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.81□□□□□ -1.32
COL1A1P02452 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.81□□□□□ -1.32
COL1A1P02452 AL121977.1-201ENST00000401636 979 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 RN7SKP216-201ENST00000411050 312 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL1A1P02452 PRUNEP1-201ENST00000425846 705 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 AC092106.1-201ENST00000444291 373 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 FAR2P1-206ENST00000449736 709 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.81□□□□□ -1.32
COL1A1P02452 RNU1-88P-201ENST00000459274 128 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 RPS21P4-201ENST00000487122 248 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.81□□□□□ -1.32
COL1A1P02452 AC006115.2-201ENST00000596823 202 ntBASIC6.81□□□□□ -1.32
COL1A1P02452 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL1A1P02452 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.81□□□□□ -1.32
COL1A1P02452 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.81□□□□□ -1.32
COL1A1P02452 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL1A1P02452 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
COL1A1P02452 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
COL1A1P02452 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.81□□□□□ -1.32
COL1A1P02452 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
COL1A1P02452 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL1A1P02452 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
COL1A1P02452 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL1A1P02452 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL1A1P02452 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL1A1P02452 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL1A1P02452 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL1A1P02452 AC079753.1-201ENST00000623243 3868 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 MIR133B-201ENST00000362210 119 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 AL451142.1-201ENST00000375867 775 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.8□□□□□ -1.32
COL1A1P02452 SNORA16A-201ENST00000384342 137 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 MIR585-201ENST00000384887 94 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 RN7SKP213-201ENST00000410746 298 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.8□□□□□ -1.32
COL1A1P02452 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.8□□□□□ -1.32
COL1A1P02452 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 RPS23P2-201ENST00000463671 415 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 AC079841.1-201ENST00000481228 950 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.8□□□□□ -1.32
COL1A1P02452 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.8□□□□□ -1.32
COL1A1P02452 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.8□□□□□ -1.32
COL1A1P02452 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.8□□□□□ -1.32
COL1A1P02452 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.8□□□□□ -1.32
COL1A1P02452 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.8□□□□□ -1.32
COL1A1P02452 AC000068.2-201ENST00000608816 460 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.8□□□□□ -1.32
COL1A1P02452 SAMMSON-209ENST00000641222 1100 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL1A1P02452 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
COL1A1P02452 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.8□□□□□ -1.32
COL1A1P02452 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
COL1A1P02452 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.8□□□□□ -1.32
COL1A1P02452 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL1A1P02452 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms