Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AP002370.1-201ENST00000528055 1602 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 ZNF733P-202ENST00000444809 1573 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 MFSD8-219ENST00000641228 2559 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 RNA5SP30-201ENST00000365552 115 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 RNA5SP339-201ENST00000390987 122 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AL360081.1-201ENST00000428299 555 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AL513343.1-201ENST00000451818 792 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AC090079.2-201ENST00000575289 768 ntBASIC8.65□□□□□ -1.02
RAPGEF3O95398 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RAPGEF3O95398 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC8.65□□□□□ -1.02
RAPGEF3O95398 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
RAPGEF3O95398 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
RAPGEF3O95398 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.65□□□□□ -1.03
RAPGEF3O95398 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 AC013488.1-201ENST00000526618 1838 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 KATNBL1P2-201ENST00000433311 835 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 DNAJA1P6-201ENST00000437347 354 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 ZNF736P11Y-201ENST00000442535 1213 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 ZNF736P12Y-201ENST00000443152 1243 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 ZNF736P4Y-201ENST00000454995 1243 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 RN7SL738P-201ENST00000470264 297 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 RPL23AP40-201ENST00000487630 390 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 BLZF2P-201ENST00000553776 1130 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 AC007494.1-201ENST00000562293 760 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 AP000240.1-201ENST00000609910 452 ntBASIC8.64□□□□□ -1.03
RAPGEF3O95398 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.64□□□□□ -1.03
RAPGEF3O95398 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
RAPGEF3O95398 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC092692.1-201ENST00000623625 2595 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RAPGEF3O95398 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC013442.1-201ENST00000397347 228 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 DUTP5-201ENST00000406790 469 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC093162.1-201ENST00000419682 124 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 AC104837.2-201ENST00000427236 424 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.63□□□□□ -1.03
RAPGEF3O95398 RPS3AP41-201ENST00000462701 778 ntBASIC8.63□□□□□ -1.03
RAPGEF3O95398 RPL38P3-201ENST00000484463 213 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms