Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL391001.1-201ENST00000602747 715 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 AL592494.3-201ENST00000609485 464 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXN3O00409 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
FOXN3O00409 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXN3O00409 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXN3O00409 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXN3O00409 MTCO1P7-201ENST00000419523 1542 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 GNG5P2-201ENST00000372054 207 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 AC099782.1-201ENST00000425889 474 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 IGLV3-4-201ENST00000432300 244 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXN3O00409 RPSAP32-201ENST00000432681 526 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AL606490.7-201ENST00000433136 191 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 ZNF619P1-201ENST00000446539 752 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AL162739.1-201ENST00000450606 307 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXN3O00409 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXN3O00409 OR7E22P-201ENST00000478335 1035 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC124945.1-201ENST00000485133 188 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 RPL29P23-201ENST00000486188 442 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 RPL23AP40-201ENST00000487630 390 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 AC015864.1-201ENST00000496512 544 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 RN7SL612P-201ENST00000497704 295 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC021087.2-201ENST00000504656 1203 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXN3O00409 ASNSP4-201ENST00000511103 447 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 NPIPB14P-203ENST00000532298 987 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXN3O00409 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXN3O00409 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXN3O00409 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXN3O00409 MIR4701-201ENST00000583094 63 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC005242.1-201ENST00000585658 438 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC119403.2-201ENST00000590960 598 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC120053.1-201ENST00000607706 736 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AL356608.1-201ENST00000610034 820 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 AC096861.1-201ENST00000616652 240 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
FOXN3O00409 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 AC003985.2-201ENST00000562268 1669 ntBASIC6.51□□□□□ -1.37
FOXN3O00409 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
FOXN3O00409 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXN3O00409 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
FOXN3O00409 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXN3O00409 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXN3O00409 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXN3O00409 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXN3O00409 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXN3O00409 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
FOXN3O00409 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 SNORA21-201ENST00000362423 132 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXN3O00409 SNORD65-201ENST00000391079 73 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 GSTA12P-201ENST00000402398 508 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 RNA5SP156-201ENST00000410250 110 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AL445213.1-201ENST00000412589 747 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXN3O00409 RPL35AP31-201ENST00000418340 337 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 THEM7P-201ENST00000419556 672 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AL365220.1-201ENST00000432923 399 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 BX679664.2-201ENST00000439282 283 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AC245517.2-201ENST00000442890 346 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXN3O00409 AC010240.2-201ENST00000445363 1205 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXN3O00409 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXN3O00409 RPL23AP73-201ENST00000492507 471 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 HMGB1P3-201ENST00000502802 616 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 CCDC11P1-201ENST00000503137 1162 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AC093770.1-201ENST00000511559 571 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXN3O00409 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXN3O00409 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXN3O00409 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXN3O00409 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXN3O00409 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms