Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM1O00151 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 RN7SL261P-201ENST00000613441 282 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 AL162574.1-201ENST00000615702 950 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM1O00151 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM1O00151 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM1O00151 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PDLIM1O00151 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDLIM1O00151 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDLIM1O00151 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 AC003045.1-201ENST00000398779 713 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM1O00151 RPS7P14-201ENST00000426405 583 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 GTF2IP14-201ENST00000441415 586 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 H3F3AP5-201ENST00000475267 429 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 AC135999.1-201ENST00000478962 479 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM1O00151 GM2AP2-201ENST00000491764 562 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 RN7SKP288-201ENST00000516227 268 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 IGHV4-55-201ENST00000520889 368 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 CYCSP25-201ENST00000525280 316 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 OR4A41P-201ENST00000533053 928 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 AC121758.1-202ENST00000556917 658 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM1O00151 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM1O00151 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM1O00151 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM1O00151 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM1O00151 AL359091.2-201ENST00000609303 556 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 uc_338.29-201ENST00000615099 168 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 MIR6133-201ENST00000617057 108 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 AL122023.1-201ENST00000622847 530 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 SNX18P12-201ENST00000624821 759 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 CASC19-221ENST00000641309 1382 ntBASIC5.64□□□□□ -1.51
PDLIM1O00151 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDLIM1O00151 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM1O00151 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDLIM1O00151 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM1O00151 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM1O00151 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM1O00151 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM1O00151 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM1O00151 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 RNA5SP375-201ENST00000362975 119 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 MTND2P12-201ENST00000417560 1252 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 RPSAP32-201ENST00000432681 526 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM1O00151 CLNS1AP1-201ENST00000435954 682 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 EMC3-AS1-205ENST00000438698 534 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM1O00151 AL591623.2-201ENST00000449978 222 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 RSU1P1-201ENST00000453416 441 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.63□□□□□ -1.51
PDLIM1O00151 RPL12P39-201ENST00000455456 496 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 ACA64.4-201ENST00000459070 127 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 RN7SL643P-201ENST00000471845 291 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM1O00151 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM1O00151 RNU6-1334P-201ENST00000516032 105 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM1O00151 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.63□□□□□ -1.51
PDLIM1O00151 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms