Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 QRSL1P1-201ENST00000400977 1540 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC117529.2-201ENST00000512159 2068 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AL031123.2-201ENST00000563225 3325 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 RNU4-73P-201ENST00000363164 141 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AL450124.1-201ENST00000376401 353 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 RNU6-452P-201ENST00000384406 107 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 PHBP1-201ENST00000392260 808 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC023141.1-201ENST00000419418 379 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 GAPDHP34-201ENST00000432112 823 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC000362.1-201ENST00000433725 425 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 snoU109.1-201ENST00000459339 135 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC018639.1-201ENST00000492994 442 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 OR5M14P-201ENST00000506803 618 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC023080.1-201ENST00000551663 931 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AL157687.1-201ENST00000554853 619 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC022432.1-201ENST00000595739 310 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC087623.4-201ENST00000606593 695 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC019193.2-201ENST00000610012 634 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC009233.1-201ENST00000616477 371 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 HTR1DP1-201ENST00000616500 888 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 AL133320.1-201ENST00000621423 2352 ntBASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHB11Q9Y5F2 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 AC093297.3-201ENST00000607056 2517 ntBASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 MARK2P10-201ENST00000454959 1437 ntBASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 RARSP1-201ENST00000542842 1418 ntBASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 AL008638.3-201ENST00000623027 5182 ntBASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 XRCC6P2-201ENST00000457831 1822 ntBASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 AC008937.3-201ENST00000606813 1700 ntBASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 MIR16-1-201ENST00000385271 89 ntBASIC7.62□□□□□ -1.19
PCDHB11Q9Y5F2 RNA5SP18-201ENST00000390935 121 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms