Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 AL109941.1-201ENST00000401925 229 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 DUTP5-201ENST00000406790 469 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 AL365220.1-201ENST00000432923 399 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 RSU1P1-201ENST00000453416 441 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 RN7SKP253-201ENST00000516424 309 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 AC137627.1-201ENST00000545761 289 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 AGGF1P7-201ENST00000562369 913 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 LINC01739-205ENST00000641890 573 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 AL162456.1-201ENST00000634535 2006 ntBASIC7.19□□□□□ -1.26
SCN11AQ9UI33 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
SCN11AQ9UI33 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AL121977.1-201ENST00000401636 979 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 TMEM183AP1-205ENST00000432739 290 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AL389915.2-201ENST00000454576 441 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 RPL7AP6-201ENST00000477943 801 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AL049779.2-201ENST00000553847 315 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 RN7SL708P-201ENST00000580952 299 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC087783.2-201ENST00000605070 562 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 HIRAP1-201ENST00000605318 787 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AL353729.2-201ENST00000605859 1249 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AL133481.2-203ENST00000607558 139 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AP004607.3-201ENST00000530354 3915 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 RPL23P2-201ENST00000320371 421 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 RN7SKP125-201ENST00000410481 302 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 RN7SL51P-201ENST00000468230 285 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 AC068769.1-201ENST00000474767 2426 ntBASIC7.18□□□□□ -1.26
SCN11AQ9UI33 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SCN11AQ9UI33 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC022164.1-201ENST00000568767 2673 ntBASIC7.17□□□□□ -1.26
SCN11AQ9UI33 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 RNU1-149P-201ENST00000390870 161 ntBASIC7.17□□□□□ -1.26
SCN11AQ9UI33 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC073850.1-201ENST00000449243 255 ntBASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC115223.1-201ENST00000466377 870 ntBASIC7.17□□□□□ -1.26
SCN11AQ9UI33 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC127381.1-201ENST00000555979 939 ntBASIC7.17□□□□□ -1.26
SCN11AQ9UI33 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.17□□□□□ -1.26
SCN11AQ9UI33 SAMMSON-209ENST00000641222 1100 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms