Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 AL034549.2-201ENST00000618285 3373 ntBASIC8.83□□□□□ -1
RIMBP3Q9UFD9 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 CYCSP29-201ENST00000533731 318 ntBASIC8.83□□□□□ -1
RIMBP3Q9UFD9 AC133555.2-201ENST00000550213 292 ntBASIC8.83□□□□□ -1
RIMBP3Q9UFD9 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RIMBP3Q9UFD9 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AC105114.1-201ENST00000624795 1862 ntBASIC8.82□□□□□ -1
RIMBP3Q9UFD9 RNU4-25P-201ENST00000410569 230 ntBASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 IGLV3-24-201ENST00000517477 197 ntBASIC8.82□□□□□ -1
RIMBP3Q9UFD9 VN1R85P-201ENST00000601587 426 ntBASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AC245060.6-201ENST00000624350 8420 ntBASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AC110716.2-201ENST00000563865 3945 ntBASIC8.82□□□□□ -1
RIMBP3Q9UFD9 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.82□□□□□ -1
RIMBP3Q9UFD9 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AL008638.3-201ENST00000623027 5182 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AP003119.3-201ENST00000566747 4192 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 FAM32BP-201ENST00000344033 333 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AL158073.1-201ENST00000426848 1104 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 RPL12P17-201ENST00000432393 498 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 CCDC11P1-201ENST00000503137 1162 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AC020593.1-201ENST00000507399 299 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 IGKV1-32-201ENST00000519290 311 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AC139493.1-201ENST00000604368 397 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AC015660.5-201ENST00000623238 564 ntBASIC8.81□□□□□ -1
RIMBP3Q9UFD9 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.81□□□□□ -1
RIMBP3Q9UFD9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms