Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC004386.1-201ENST00000393214 761 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 PTP4A1P1-201ENST00000420539 515 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 MTCO1P51-201ENST00000427672 1060 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 RPL12P16-201ENST00000431098 498 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 Z85994.2-201ENST00000434327 452 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 GAPDHP48-201ENST00000436626 961 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 RAB28P3-201ENST00000448325 597 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 FRG2FP-204ENST00000453982 852 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC093166.4-201ENST00000457867 318 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC006539.1-201ENST00000481419 501 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 OR5H7P-201ENST00000514084 930 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AC009120.7-201ENST00000623452 780 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AP000550.3-201ENST00000637734 379 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 PARP4P2-201ENST00000446672 3326 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC018628.1-201ENST00000624147 3819 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 OR13C3-201ENST00000374781 1108 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 OR7E156P-201ENST00000400303 464 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 YY1P1-201ENST00000427625 668 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 KRT8P51-201ENST00000438938 274 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 RSU1P1-201ENST00000453416 441 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC022336.1-201ENST00000475510 337 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 RN7SL649P-201ENST00000496974 275 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AP003396.4-201ENST00000527574 265 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC005363.1-201ENST00000530779 351 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 PCNAP4-201ENST00000532690 730 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC022387.2-201ENST00000604050 448 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 RPL12P48-201ENST00000605620 304 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC016911.1-201ENST00000613297 452 ntBASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BLOC1S4Q9NUP1 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
BLOC1S4Q9NUP1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms