Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC079922.1-201ENST00000443291 359 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AL512593.1-201ENST00000444758 779 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC016027.4-201ENST00000450866 277 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC110749.1-201ENST00000462007 357 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC091544.1-201ENST00000484702 348 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AL136038.1-201ENST00000497246 351 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC026782.2-201ENST00000510845 636 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC022726.2-201ENST00000634673 547 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 AC083837.1-201ENST00000565297 2994 ntBASIC6□□□□□ -1.45
TM9SF3Q9HD45 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
TM9SF3Q9HD45 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TM9SF3Q9HD45 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AP001284.1-201ENST00000528393 2118 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 RNU105B-201ENST00000364478 208 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 RNU11-6P-201ENST00000391127 133 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 RPL23AP17-201ENST00000401064 499 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 RN7SKP293-201ENST00000411389 296 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 GTF3AP1-201ENST00000416942 1004 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 MARK2P12-201ENST00000420129 585 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 RPS15AP30-201ENST00000420976 390 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 GAPDHP48-201ENST00000436626 961 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AL022319.1-201ENST00000458183 1167 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AL355032.1-201ENST00000472981 438 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 OR2A3P-201ENST00000493774 953 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC008126.1-201ENST00000549019 480 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AL356801.1-201ENST00000559320 294 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 OR8G7P-201ENST00000616658 848 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC073869.7-201ENST00000640874 297 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC116667.2-201ENST00000641075 823 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 AC092692.1-201ENST00000623625 2595 ntBASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.99□□□□□ -1.45
TM9SF3Q9HD45 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM9SF3Q9HD45 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.98□□□□□ -1.45
TM9SF3Q9HD45 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TM9SF3Q9HD45 AC232271.1-201ENST00000602455 2715 ntBASIC5.98□□□□□ -1.45
TM9SF3Q9HD45 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.98□□□□□ -1.45
TM9SF3Q9HD45 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM9SF3Q9HD45 NLRP3P1-201ENST00000622303 1785 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms