Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 Y_RNA.688-201ENST00000516565 95 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC026826.3-201ENST00000561747 158 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 MIR3154-201ENST00000577829 84 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC016839.1-201ENST00000578162 867 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC087575.1-201ENST00000585087 229 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC125494.2-201ENST00000602431 657 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CD248Q9HCU0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CD248Q9HCU0 Z97989.1-201ENST00000531702 2421 ntBASIC6.76□□□□□ -1.33
CD248Q9HCU0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.76□□□□□ -1.33
CD248Q9HCU0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CD248Q9HCU0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CD248Q9HCU0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC112255.1-201ENST00000624070 2493 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC011369.2-201ENST00000624423 1567 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AL592429.1-201ENST00000403909 1473 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 RN7SKP15-201ENST00000364742 309 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 MRPS6P2-201ENST00000381143 370 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 RNU6-1257P-201ENST00000384625 110 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 SKINT1L-201ENST00000401057 817 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AL049545.1-201ENST00000401856 572 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 PRELID1P1-201ENST00000403549 660 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 CYCSP17-201ENST00000407870 315 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 DPPA2P2-201ENST00000418220 897 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC016907.1-201ENST00000419483 435 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 RCC2P2-201ENST00000422174 918 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 GPN3P1-201ENST00000423883 535 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 RPS6P15-201ENST00000431996 751 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 POU5F1P5-201ENST00000445059 658 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 RPL5P10-201ENST00000445207 894 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 RSU1P1-201ENST00000453416 441 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC007834.2-201ENST00000536310 343 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC092375.1-201ENST00000550410 637 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 RN7SL230P-201ENST00000580835 303 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 PIGPP4-201ENST00000584447 307 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC068620.3-201ENST00000602749 560 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AL359704.2-201ENST00000604335 521 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AL163051.2-201ENST00000618976 735 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AP006248.3-201ENST00000623580 594 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AP003476.1-201ENST00000623984 516 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 AL121594.5-201ENST00000631724 573 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 CASC19-274ENST00000642018 970 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 LCOR-201ENST00000286067 4542 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD248Q9HCU0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 WDR95P-201ENST00000425638 1542 ntBASIC6.75□□□□□ -1.33
CD248Q9HCU0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CD248Q9HCU0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms