Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 DHFRP1-201ENST00000579682 559 ntBASIC6.96□□□□□ -1.3
UPF2Q9HAU5 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 MIR7853-201ENST00000584820 132 ntBASIC6.96□□□□□ -1.3
UPF2Q9HAU5 AC073389.3-201ENST00000609434 935 ntBASIC6.96□□□□□ -1.3
UPF2Q9HAU5 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 AC004158.1-201ENST00000564508 4319 ntBASIC6.96□□□□□ -1.3
UPF2Q9HAU5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UPF2Q9HAU5 AC079097.1-201ENST00000512187 1399 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RNA5SP110-201ENST00000362638 115 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC005042.1-201ENST00000393397 800 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RN7SKP108-201ENST00000411367 328 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RPL35AP3-201ENST00000414680 288 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RPL7AP51-201ENST00000422016 760 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RPL5P25-201ENST00000441148 775 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 PPIAP7-201ENST00000454070 489 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RN7SL552P-201ENST00000462094 276 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 RN7SL269P-201ENST00000467795 305 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 USP9YP2-201ENST00000504503 1000 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 USP9YP1-201ENST00000513521 1002 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AP000620.1-201ENST00000527147 504 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC122688.1-201ENST00000541494 223 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC007346.1-201ENST00000569208 867 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 CCDC58P1-201ENST00000578567 430 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.95□□□□□ -1.3
UPF2Q9HAU5 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.95□□□□□ -1.3
UPF2Q9HAU5 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 MIR130A-201ENST00000385274 89 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 ARMC4P1-201ENST00000438905 707 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC010240.2-201ENST00000445363 1205 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 RN7SL188P-201ENST00000469842 285 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 GAPDHP71-201ENST00000511530 1003 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC093524.1-201ENST00000564266 1094 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC019322.1-201ENST00000571869 389 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AC010632.3-201ENST00000611377 369 ntBASIC6.94□□□□□ -1.3
UPF2Q9HAU5 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF2Q9HAU5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms