Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 CCNB2P1-201ENST00000399411 1150 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 SNRPEP6-201ENST00000407465 277 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 MTND4LP7-201ENST00000431728 294 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 DEFA9P-201ENST00000433042 285 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 Z84478.1-201ENST00000438230 1219 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AL691517.1-201ENST00000440833 1235 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 COPS8P2-201ENST00000473228 627 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 STRADBP1-201ENST00000478954 1281 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 RNA5SP400-201ENST00000517155 111 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 OR4R2P-201ENST00000530815 597 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 QTRT1P1-201ENST00000604344 1078 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 MAPK10-350ENST00000641777 965 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AL512283.1-201ENST00000606756 1384 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 ST13P16-201ENST00000401760 781 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AL445928.1-201ENST00000435545 222 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 RPS7P3-201ENST00000443360 580 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 SPRYD7P1-201ENST00000443861 570 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 VN1R48P-201ENST00000448149 1036 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 CYCSP53-201ENST00000455540 265 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC073594.1-201ENST00000462065 364 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 GAPDHP71-201ENST00000511530 1003 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC134349.2-201ENST00000535136 910 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 DPPA2P4-201ENST00000563717 878 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC098483.2-201ENST00000603158 454 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 AC011815.2-201ENST00000618230 2021 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 MIR6730-201ENST00000622213 67 ntBASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RTFDC1Q9BY42 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 RN7SKP124-201ENST00000364730 341 ntBASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 DPPA2P3-201ENST00000411853 655 ntBASIC7.3□□□□□ -1.24
RTFDC1Q9BY42 MRPL53P1-201ENST00000414323 319 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 277.2 ms