Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 RPL5P25-201ENST00000441148 775 ntBASIC5.4□□□□□ -1.54
VPS13AQ96RL7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 MIR4284-201ENST00000578924 81 ntBASIC5.4□□□□□ -1.54
VPS13AQ96RL7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS13AQ96RL7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VPS13AQ96RL7 AC092821.3-202ENST00000641304 2767 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 ELOCP19-201ENST00000411919 318 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 DDX39BP1-205ENST00000422507 192 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS13AQ96RL7 MRPS33P2-201ENST00000507850 322 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 HMGB1P44-201ENST00000508597 572 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 AC092490.3-201ENST00000545370 572 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 AC091042.1-201ENST00000579213 173 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 AC095055.1-201ENST00000603472 1113 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 AC019193.2-201ENST00000610012 634 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
VPS13AQ96RL7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.4□□□□□ -1.55
VPS13AQ96RL7 AC092692.1-201ENST00000623625 2595 ntBASIC5.4□□□□□ -1.55
VPS13AQ96RL7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS13AQ96RL7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AP002991.2-201ENST00000623807 2801 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AL078599.1-201ENST00000402075 293 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC069213.2-201ENST00000420238 366 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC139697.1-201ENST00000548429 745 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC009597.2-201ENST00000604659 592 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 USP9YP3-201ENST00000434481 1766 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 MAPK10-323ENST00000641493 3207 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 MED28P3-201ENST00000444288 531 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC009127.1-201ENST00000467090 155 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 RN7SKP99-201ENST00000517028 307 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 RPL26P30-202ENST00000602923 645 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC130304.1-201ENST00000622942 2385 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 LINC01616-201ENST00000561816 2280 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 RBMY2TP-201ENST00000451162 947 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC112187.1-201ENST00000455837 479 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC091167.1-201ENST00000492017 396 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC093720.1-201ENST00000505681 714 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AP006289.1-201ENST00000538089 277 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 BNIP3P33-201ENST00000598912 569 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 AL445423.1-201ENST00000609941 536 ntBASIC5.39□□□□□ -1.55
VPS13AQ96RL7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS13AQ96RL7 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.38□□□□□ -1.55
VPS13AQ96RL7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS13AQ96RL7 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS13AQ96RL7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS13AQ96RL7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS13AQ96RL7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS13AQ96RL7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS13AQ96RL7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms