Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 SETP21-201ENST00000514799 892 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC008055.1-201ENST00000547032 609 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC090826.1-203ENST00000569235 490 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 MIR3936-201ENST00000584304 110 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL513327.3-201ENST00000602618 469 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AP001823.1-201ENST00000604056 1003 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL133481.2-203ENST00000607558 139 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 uc_338.26-201ENST00000612659 160 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC022106.1-201ENST00000612834 766 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 GAPDHP41-201ENST00000613707 975 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL445670.1-201ENST00000618889 801 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC092376.2-201ENST00000622621 4116 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 MTCO1P46-201ENST00000451639 1491 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
AP1S3Q96PC3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
AP1S3Q96PC3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CASC19-246ENST00000641625 1606 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RN7SKP185-201ENST00000362813 326 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RN7SKP145-201ENST00000363291 303 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 SNORD94-201ENST00000386037 137 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AL117344.1-201ENST00000407196 616 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RN7SKP286-201ENST00000410894 299 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CTSL3P-202ENST00000412179 788 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 OR52N3P-201ENST00000413417 934 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AL360013.1-201ENST00000419031 858 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RPL12P12-201ENST00000424633 501 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC113412.1-201ENST00000425840 504 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CRIP1P1-201ENST00000427567 185 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AL512593.1-201ENST00000444758 779 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC012512.1-201ENST00000446594 718 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 COX4I1P2-201ENST00000447446 547 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 FRG2FP-204ENST00000453982 852 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RNU1-88P-201ENST00000459274 128 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC093664.1-201ENST00000511779 289 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RN7SKP64-201ENST00000517206 328 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC103855.4-201ENST00000533158 265 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC124891.1-201ENST00000536322 519 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 NIFKP4-201ENST00000567275 1192 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 AL353729.2-201ENST00000605859 1249 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CLUHP10-201ENST00000631979 980 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 FRG1EP-201ENST00000634469 770 ntBASIC4.33□□□□□ -1.72
AP1S3Q96PC3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S3Q96PC3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms