Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TOPBP1Q92547 AC005224.3-201ENST00000584683 2140 ntBASIC9.32□□□□□ -0.92
TOPBP1Q92547 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOPBP1Q92547 AL133243.4-201ENST00000623116 3109 ntBASIC9.32□□□□□ -0.92
TOPBP1Q92547 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 EPS15P1-202ENST00000459691 2071 ntBASIC9.32□□□□□ -0.92
TOPBP1Q92547 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 AL162456.1-201ENST00000634535 2006 ntBASIC9.32□□□□□ -0.92
TOPBP1Q92547 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOPBP1Q92547 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 RNA5SP487-201ENST00000410186 122 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC093655.2-201ENST00000425735 631 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 USP9YP9-201ENST00000429406 715 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 TEX41-205ENST00000431734 529 ntTSL 4 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AL138878.2-201ENST00000440581 1241 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 HNRNPDLP2-201ENST00000455248 751 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 HMGB1P44-201ENST00000508597 572 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC074050.1-201ENST00000563247 211 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC068790.4-201ENST00000602474 263 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC020765.1-201ENST00000604296 328 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC005084.1-201ENST00000605160 304 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC010435.1-201ENST00000623353 1177 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 RPL31P44-201ENST00000447680 377 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 AL672138.1-201ENST00000450604 1015 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC9.31□□□□□ -0.92
TOPBP1Q92547 AC112694.2-201ENST00000623697 768 ntBASIC9.31□□□□□ -0.92
TOPBP1Q92547 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TOPBP1Q92547 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 AL353625.1-202ENST00000366273 571 ntBASIC9.3□□□□□ -0.92
TOPBP1Q92547 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 AC011742.2-201ENST00000443818 352 ntBASIC9.3□□□□□ -0.92
TOPBP1Q92547 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC9.3□□□□□ -0.92
TOPBP1Q92547 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOPBP1Q92547 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TOPBP1Q92547 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 AC211486.3-201ENST00000412694 621 ntBASIC9.29□□□□□ -0.92
TOPBP1Q92547 TMA16P2-201ENST00000413187 601 ntBASIC9.29□□□□□ -0.92
TOPBP1Q92547 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 CSNK1A1P3-201ENST00000504105 330 ntBASIC9.29□□□□□ -0.92
TOPBP1Q92547 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.29□□□□□ -0.92
TOPBP1Q92547 AC011497.2-201ENST00000600255 639 ntBASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms