Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU1-84P-201ENST00000365447 164 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU6-1320P-201ENST00000390838 107 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU6-932P-201ENST00000391108 106 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU6-1269P-201ENST00000391139 107 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 BTF3P8-201ENST00000414577 526 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 OR2X1P-201ENST00000421144 687 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 NAP1L4P2-201ENST00000425958 899 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 MTCYBP31-201ENST00000438855 1122 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 PMS2P9-201ENST00000441237 515 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RPL5P7-201ENST00000444235 813 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 Z77249.1-201ENST00000444622 1175 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 SEPT14P24-201ENST00000447236 180 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU6-599P-201ENST00000459383 107 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU6-1193P-201ENST00000459461 107 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC134050.1-201ENST00000495088 933 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC021220.1-201ENST00000507445 630 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 OR5AK3P-201ENST00000527486 1297 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 TRIM51DP-201ENST00000529746 596 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC244502.2-201ENST00000543361 851 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 GARSP1-201ENST00000570895 719 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 GAS5-AS1-201ENST00000602767 694 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC096586.1-201ENST00000610267 561 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU6-368P-201ENST00000620928 107 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 RNU6-538P-201ENST00000622329 107 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC120349.3-201ENST00000624377 529 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 MTND2P41-201ENST00000637599 773 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AC074141.1-201ENST00000588129 2995 ntBASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNPOQ8N3V7 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AL021877.2-201ENST00000624442 10684 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 RNU6-224P-201ENST00000384055 107 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AL035419.1-201ENST00000397037 564 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 MTCO2P31-201ENST00000402702 684 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC115283.1-201ENST00000427353 400 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 RPL5P2-201ENST00000429598 854 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 CR769776.1-201ENST00000441254 787 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 HMGB1P7-201ENST00000450921 612 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 OR4A21P-201ENST00000532759 944 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC006518.2-201ENST00000542513 940 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AL356801.1-201ENST00000559320 294 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AC020765.1-201ENST00000604296 328 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 SNORD96A-201ENST00000606577 79 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 AL365181.4-201ENST00000609800 547 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms