Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AP005131.7-201ENST00000610087 611 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC079395.2-201ENST00000610982 737 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC016769.4-201ENST00000616893 535 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AL357562.1-201ENST00000624911 609 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC009779.8-201ENST00000641684 4384 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 RNU6-670P-201ENST00000364312 104 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 VN1R31P-201ENST00000417498 730 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 ARAFP1-201ENST00000422172 605 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 NANOGP4-201ENST00000427230 913 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 DEFA9P-201ENST00000433042 285 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC073909.1-201ENST00000447112 999 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 TAAR4P-201ENST00000454843 1039 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 DUTP7-201ENST00000507982 486 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC074087.1-201ENST00000512059 724 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 NPM1P21-201ENST00000513394 762 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 ACTR6P1-201ENST00000514311 1104 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC084337.1-201ENST00000524809 686 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC005000.1-201ENST00000536192 288 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 MIR4700-201ENST00000578311 74 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 MIR4505-201ENST00000582238 73 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC084036.1-201ENST00000609190 508 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AL136295.6-201ENST00000610486 658 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC104307.1-201ENST00000616142 196 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AP001885.1-201ENST00000621658 558 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC012254.3-201ENST00000591183 2117 ntBASIC6.59□□□□□ -1.35
HERC6Q8IVU3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HERC6Q8IVU3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HERC6Q8IVU3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.36
HERC6Q8IVU3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
HERC6Q8IVU3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HERC6Q8IVU3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
HERC6Q8IVU3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.59□□□□□ -1.36
HERC6Q8IVU3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
HERC6Q8IVU3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 RNU1-19P-201ENST00000363306 165 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 SNORA43.1-201ENST00000364863 140 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 RNU6-883P-201ENST00000384597 107 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC007068.1-201ENST00000396690 844 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AL445238.1-204ENST00000400311 463 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 SPTLC1P2-201ENST00000407089 121 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 NPM1P4-201ENST00000414095 812 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 KIF4CP-201ENST00000422742 1279 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms