Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 RAB28P2-201ENST00000454299 641 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 CST12P-201ENST00000457644 362 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 ACA64.1-201ENST00000459171 127 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 RN7SL101P-201ENST00000496350 279 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 ASNSP4-201ENST00000511103 447 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AP001858.2-201ENST00000536213 601 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC068305.2-201ENST00000550567 1205 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 NPM1P5-201ENST00000557228 838 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 OOSP1P2-201ENST00000579644 351 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC027243.2-201ENST00000602530 724 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AP001823.1-201ENST00000604056 1003 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AL353684.1-201ENST00000622677 1120 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC103703.1-201ENST00000634783 663 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 RNA5SP477-201ENST00000362639 119 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 SNORA11B-201ENST00000408175 129 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC130360.1-201ENST00000425489 1117 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 BX276092.6-201ENST00000430476 250 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AL512593.1-201ENST00000444758 779 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 BX276092.8-201ENST00000455722 250 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 PSMA2P2-201ENST00000504319 686 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC106872.4-201ENST00000510050 523 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 PRMT5P1-201ENST00000514351 598 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 SNORD46.2-201ENST00000516021 102 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC022826.1-201ENST00000519383 805 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC130365.2-201ENST00000525882 1201 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC126615.2-201ENST00000553003 515 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC007956.1-201ENST00000555623 542 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC011445.2-201ENST00000599274 173 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC068768.2-201ENST00000602352 343 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AL355974.3-201ENST00000617383 467 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC241377.1-201ENST00000619797 406 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 SAMM50P1-201ENST00000455403 1399 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 AC005261.6-201ENST00000623072 1387 ntBASIC5.55□□□□□ -1.52
CCDC71Q8IV32 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC71Q8IV32 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 AC008627.1-201ENST00000517511 1704 ntBASIC5.54□□□□□ -1.52
CCDC71Q8IV32 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 SNORA21-201ENST00000362423 132 ntBASIC5.54□□□□□ -1.52
CCDC71Q8IV32 RNA5SP453-201ENST00000362503 119 ntBASIC5.54□□□□□ -1.52
CCDC71Q8IV32 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC71Q8IV32 AL132875.1-201ENST00000403623 949 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms