Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC002310.3-201ENST00000569728 723 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AP002802.2-201ENST00000605877 235 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AL669942.2-201ENST00000620352 697 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC012653.2-201ENST00000621880 420 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC020658.2-201ENST00000559030 4020 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AL627171.1-201ENST00000618845 1308 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CCDC144BQ3MJ40 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC096533.1-201ENST00000411645 353 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 EIF4A1P1-201ENST00000420241 934 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 MTCO2P17-201ENST00000424336 677 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC083862.1-201ENST00000427378 1242 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC069154.1-201ENST00000432914 542 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 HMGB1P5-202ENST00000451497 985 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 OFD1P3Y-201ENST00000453312 783 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AL158211.1-201ENST00000566763 763 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AL589863.1-201ENST00000595383 631 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC124916.2-201ENST00000604416 224 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AL512427.1-201ENST00000618593 349 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC021422.1-201ENST00000621212 473 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC008993.2-201ENST00000631744 806 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 AC083865.1-201ENST00000636634 831 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 PRNCR1-201ENST00000635449 12727 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 CDC27P2-201ENST00000425026 1922 ntBASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC144BQ3MJ40 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC092642.1-201ENST00000392417 425 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 GCNT1P4-201ENST00000404096 329 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 MTCO2P8-201ENST00000412213 658 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC073310.1-201ENST00000423226 1033 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms