Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 AL136520.1-201ENST00000600311 1322 ntBASIC5.67□□□□□ -1.5
CENPAP49450 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.67□□□□□ -1.5
CENPAP49450 AC083843.2-201ENST00000568248 6253 ntBASIC5.67□□□□□ -1.5
CENPAP49450 RPL31P11-201ENST00000426558 1558 ntBASIC5.67□□□□□ -1.5
CENPAP49450 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CENPAP49450 AC011504.1-201ENST00000623331 4103 ntBASIC5.67□□□□□ -1.5
CENPAP49450 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 AC005702.3-201ENST00000585345 1447 ntBASIC5.66□□□□□ -1.5
CENPAP49450 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CENPAP49450 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CENPAP49450 OR56A4-201ENST00000330728 1209 ntBASIC5.66□□□□□ -1.5
CENPAP49450 SNORD115-48-201ENST00000364764 76 ntBASIC5.66□□□□□ -1.5
CENPAP49450 RNU1-59P-201ENST00000364829 162 ntBASIC5.66□□□□□ -1.5
CENPAP49450 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CENPAP49450 RPL23AP17-201ENST00000401064 499 ntBASIC5.66□□□□□ -1.5
CENPAP49450 MEAF6P1-201ENST00000416092 327 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 AC007562.1-201ENST00000421819 517 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL121882.1-201ENST00000422893 417 ntBASIC5.66□□□□□ -1.5
CENPAP49450 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 NPM1P23-201ENST00000440193 849 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 AC023274.2-201ENST00000445264 521 ntBASIC5.66□□□□□ -1.5
CENPAP49450 BUD31P2-201ENST00000449374 300 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 EIF2S2P4-201ENST00000461070 984 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL355032.1-201ENST00000472981 438 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AC105918.1-201ENST00000474399 838 ntBASIC5.66□□□□□ -1.5
CENPAP49450 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 HMGN1P15-201ENST00000513870 295 ntBASIC5.66□□□□□ -1.5
CENPAP49450 CYP4F27P-201ENST00000514557 494 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 AC008147.3-201ENST00000548666 354 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 AC026956.1-201ENST00000558741 396 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AC093510.2-201ENST00000562820 896 ntBASIC5.66□□□□□ -1.5
CENPAP49450 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.66□□□□□ -1.5
CENPAP49450 CCDC58P1-201ENST00000578567 430 ntBASIC5.66□□□□□ -1.5
CENPAP49450 MIR5010-201ENST00000582846 120 ntBASIC5.66□□□□□ -1.5
CENPAP49450 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.66□□□□□ -1.5
CENPAP49450 AC005776.1-201ENST00000603164 290 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL591222.2-201ENST00000604443 754 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL078624.2-201ENST00000605063 554 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL390877.1-201ENST00000605704 214 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AL021368.3-201ENST00000607119 578 ntBASIC5.66□□□□□ -1.5
CENPAP49450 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 U1.25-201ENST00000614085 162 ntBASIC5.66□□□□□ -1.5
CENPAP49450 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 U1.31-201ENST00000620022 160 ntBASIC5.66□□□□□ -1.5
CENPAP49450 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CENPAP49450 LINC02495-203ENST00000636704 242 ntBASIC5.66□□□□□ -1.5
CENPAP49450 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CENPAP49450 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.66□□□□□ -1.5
CENPAP49450 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CENPAP49450 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CENPAP49450 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CENPAP49450 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
CENPAP49450 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms