Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.2□□□□□ -1.42
PTPN9P43378 CYCSP38-201ENST00000559840 322 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC007346.2-201ENST00000564816 892 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.2□□□□□ -1.42
PTPN9P43378 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.2□□□□□ -1.42
PTPN9P43378 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.2□□□□□ -1.42
PTPN9P43378 NPM1P45-201ENST00000583151 559 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 ADAD1P2-201ENST00000588476 646 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PTPN9P43378 AC006115.2-201ENST00000596823 202 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC108673.3-201ENST00000609183 335 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC092574.1-201ENST00000609771 420 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AL021918.2-201ENST00000613415 194 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 WBP1LP8-201ENST00000617401 327 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AL445670.1-201ENST00000618889 801 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC020763.5-201ENST00000623298 430 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC073592.6-201ENST00000624271 415 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 SNX18P12-201ENST00000624821 759 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.2□□□□□ -1.42
PTPN9P43378 MAPK10-350ENST00000641777 965 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PTPN9P43378 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.2□□□□□ -1.42
PTPN9P43378 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
PTPN9P43378 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PTPN9P43378 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 RNFT1P3-201ENST00000340898 1052 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 RN7SKP187-201ENST00000365536 330 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC016739.1-201ENST00000405359 345 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 CR848007.2-201ENST00000424918 787 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 EIF2S2P3-201ENST00000428356 999 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 USP24P1-201ENST00000433802 779 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 RPS12P17-201ENST00000438591 377 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 Z83838.1-202ENST00000456225 839 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC019084.1-201ENST00000457337 432 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.19□□□□□ -1.42
PTPN9P43378 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.19□□□□□ -1.42
PTPN9P43378 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN9P43378 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 snoU109.5-201ENST00000516231 132 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 SCARNA18.1-201ENST00000516330 83 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 RN7SKP238-201ENST00000516483 249 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC011853.1-201ENST00000518911 454 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 OR5D2P-201ENST00000524390 911 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.19□□□□□ -1.42
PTPN9P43378 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN9P43378 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.19□□□□□ -1.42
PTPN9P43378 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN9P43378 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN9P43378 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 AC009237.12-201ENST00000604755 742 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AP002371.2-201ENST00000624450 503 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC073593.1-201ENST00000624500 411 ntBASIC6.19□□□□□ -1.42
PTPN9P43378 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PTPN9P43378 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PTPN9P43378 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PTPN9P43378 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PTPN9P43378 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN9P43378 CASC19-255ENST00000641733 1385 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 GTF2IP4-201ENST00000453092 2054 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AL161756.3-201ENST00000641216 2071 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 RNU2-72P-201ENST00000411175 163 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.18□□□□□ -1.42
PTPN9P43378 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN9P43378 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN9P43378 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 AJ239321.1-201ENST00000424255 564 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN9P43378 BX679664.2-201ENST00000439282 283 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms