Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC023490.2-201ENST00000359859 470 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGCLP35914 NACAP7-201ENST00000407371 609 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 HMGN1P20-201ENST00000411849 300 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 BX323845.3-201ENST00000428215 527 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCLP35914 KRT8P51-201ENST00000438938 274 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCLP35914 HLA-DPA3-207ENST00000454398 229 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.8□□□□□ -1.48
HMGCLP35914 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.8□□□□□ -1.48
HMGCLP35914 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGCLP35914 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCLP35914 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCLP35914 AC126615.2-201ENST00000553003 515 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCLP35914 ZNF322P1-201ENST00000568013 1209 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 AC092121.1-201ENST00000569452 202 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 NANOGP3-201ENST00000605855 286 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 AC022919.1-201ENST00000624979 626 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCLP35914 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCLP35914 OR8G3P-202ENST00000641572 1255 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCLP35914 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCLP35914 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCLP35914 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCLP35914 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 AL591135.1-201ENST00000401578 5914 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HMGCLP35914 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCLP35914 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 U3.23-201ENST00000391132 200 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 RAB5CP1-201ENST00000395972 580 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 RPS3AP2-201ENST00000407190 754 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 RNU6-233P-201ENST00000410845 141 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 RN7SKP279-201ENST00000411383 298 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 SLC20A1P1-201ENST00000413906 956 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 VN1R21P-201ENST00000426703 765 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCLP35914 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.79□□□□□ -1.48
HMGCLP35914 RPSAP41-201ENST00000439695 860 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCLP35914 AP006222.1-205ENST00000450734 457 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC011476.1-201ENST00000466725 307 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC094085.1-201ENST00000468914 584 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 PDCL3P4-201ENST00000489621 720 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCLP35914 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCLP35914 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCLP35914 AC105384.2-201ENST00000508433 640 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC026782.2-201ENST00000510845 636 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC074255.1-201ENST00000511259 501 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.79□□□□□ -1.48
HMGCLP35914 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCLP35914 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 NDUFA5P11-201ENST00000567995 343 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCLP35914 AP001267.4-201ENST00000602598 545 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 AL133481.2-203ENST00000607558 139 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 AC022400.9-201ENST00000623633 273 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMGCLP35914 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCLP35914 XKRY2-202ENST00000623874 1581 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 XKRY-202ENST00000624960 1581 ntBASIC5.79□□□□□ -1.48
HMGCLP35914 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCLP35914 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCLP35914 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCLP35914 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms