Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
APOBP04114 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBP04114 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
APOBP04114 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
APOBP04114 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBP04114 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBP04114 AC092821.2-201ENST00000545710 2042 ntBASIC3.4□□□□□ -1.87
APOBP04114 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 AL121886.1-201ENST00000358609 435 ntBASIC3.4□□□□□ -1.87
APOBP04114 RNU1-24P-201ENST00000364285 165 ntBASIC3.4□□□□□ -1.87
APOBP04114 MIR1193-201ENST00000408109 78 ntBASIC3.4□□□□□ -1.87
APOBP04114 AC004975.1-201ENST00000428733 208 ntBASIC3.4□□□□□ -1.87
APOBP04114 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBP04114 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.4□□□□□ -1.87
APOBP04114 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBP04114 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.4□□□□□ -1.87
APOBP04114 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.4□□□□□ -1.87
APOBP04114 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 AP004607.3-201ENST00000530354 3915 ntBASIC3.4□□□□□ -1.87
APOBP04114 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.4□□□□□ -1.87
APOBP04114 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 AC104964.2-201ENST00000562242 4641 ntBASIC3.4□□□□□ -1.87
APOBP04114 CNOT7P1-201ENST00000429006 852 ntBASIC3.4□□□□□ -1.87
APOBP04114 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC3.4□□□□□ -1.87
APOBP04114 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC3.4□□□□□ -1.87
APOBP04114 RN7SL352P-201ENST00000466002 277 ntBASIC3.4□□□□□ -1.87
APOBP04114 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
APOBP04114 TPM3P3-201ENST00000521343 354 ntBASIC3.4□□□□□ -1.87
APOBP04114 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.4□□□□□ -1.87
APOBP04114 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 AC007494.1-201ENST00000562293 760 ntBASIC3.4□□□□□ -1.87
APOBP04114 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBP04114 SAMM50P1-201ENST00000455403 1399 ntBASIC3.4□□□□□ -1.87
APOBP04114 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
APOBP04114 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBP04114 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 RNA5SP326-201ENST00000363209 110 ntBASIC3.39□□□□□ -1.87
APOBP04114 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
APOBP04114 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 AC007064.3-201ENST00000422608 359 ntBASIC3.39□□□□□ -1.87
APOBP04114 MORF4L1P3-201ENST00000525966 950 ntBASIC3.39□□□□□ -1.87
APOBP04114 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APOBP04114 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APOBP04114 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBP04114 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBP04114 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC3.39□□□□□ -1.87
APOBP04114 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 KYNUP3-201ENST00000574386 1341 ntBASIC3.39□□□□□ -1.87
APOBP04114 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC3.39□□□□□ -1.87
APOBP04114 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APOBP04114 RNA5SP113-201ENST00000410486 84 ntBASIC3.39□□□□□ -1.87
APOBP04114 GJA6P-201ENST00000415117 1042 ntBASIC3.39□□□□□ -1.87
APOBP04114 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.39□□□□□ -1.87
APOBP04114 OR13K1P-201ENST00000444577 975 ntBASIC3.39□□□□□ -1.87
APOBP04114 EIF2S2P2-201ENST00000447161 982 ntBASIC3.39□□□□□ -1.87
APOBP04114 OR4A17P-201ENST00000526032 904 ntBASIC3.39□□□□□ -1.87
APOBP04114 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.39□□□□□ -1.87
APOBP04114 AC233699.1-201ENST00000569955 1168 ntBASIC3.39□□□□□ -1.87
APOBP04114 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms