Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC007346.2-201ENST00000564816 892 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC012146.2-201ENST00000576545 416 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MIR3614-201ENST00000581261 86 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC060780.2-201ENST00000589047 198 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC006115.2-201ENST00000596823 202 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 FAM27E4-201ENST00000605259 342 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL136228.1-201ENST00000622221 319 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL512356.3-201ENST00000623005 461 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC091305.2-201ENST00000624049 1576 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC089998.1-201ENST00000548575 3141 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ZNF969P-201ENST00000510345 2341 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL158152.1-201ENST00000602652 1435 ntBASIC4.72□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.71□□□□□ -1.65
TCRBV4S1A1TA0A5B7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TCRBV4S1A1TA0A5B7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TCRBV4S1A1TA0A5B7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 NEPNP-201ENST00000404786 1371 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 OR52B3P-201ENST00000314715 928 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MIR323A-201ENST00000362199 86 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RNA5SP284-201ENST00000384547 118 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 U3.23-201ENST00000391132 200 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RNA5SP178-201ENST00000410380 128 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL354868.1-201ENST00000417077 482 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC104843.2-201ENST00000427666 297 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC242426.1-201ENST00000435270 960 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RPL23AP19-201ENST00000436229 369 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL512593.1-201ENST00000444758 779 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AP006222.1-205ENST00000450734 457 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 NXT1P1-201ENST00000458481 316 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL122020.1-201ENST00000472287 459 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC007998.1-201ENST00000474156 672 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PPIAP19-201ENST00000486414 492 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 ZNF322P1-201ENST00000568013 1209 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MIR4776-2-201ENST00000580204 80 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC012254.3-201ENST00000591183 2117 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC025857.2-201ENST00000602711 238 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MIR6862-1-201ENST00000613016 70 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MIR6862-2-201ENST00000614755 70 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC096861.1-201ENST00000616652 240 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL355974.3-201ENST00000617383 467 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC127024.6-201ENST00000621598 424 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL161912.4-201ENST00000623889 2468 ntBASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV4S1A1TA0A5B7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC130304.1-201ENST00000622942 2385 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms