Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC006967.1-201ENST00000467608 589 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC105384.2-201ENST00000508433 640 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 MTCYBP44-201ENST00000514835 823 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 RNA5SP497-201ENST00000516081 97 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC105206.2-201ENST00000523556 515 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC087521.3-202ENST00000526408 743 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AP001767.2-201ENST00000527291 382 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 PSMC1P8-201ENST00000536820 1296 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC025252.2-201ENST00000537470 502 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 RN7SL371P-201ENST00000578099 267 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC006120.1-201ENST00000579375 546 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 OR1AB1P-201ENST00000585564 761 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC009237.13-201ENST00000603193 276 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AL109918.2-201ENST00000605188 279 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC087894.3-201ENST00000623682 349 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 ILK-216ENST00000627400 111 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC026108.1-201ENST00000635444 547 ntBASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01558Q9Y6Z2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 PSMC1P6-201ENST00000477233 1319 ntBASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 FANCD2P2-201ENST00000437591 1400 ntBASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01558Q9Y6Z2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 TTTY25P-201ENST00000558356 1505 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 RNA5SP326-201ENST00000363209 110 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 RNU105B-201ENST00000364478 208 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 RNA5SP513-201ENST00000364648 118 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 AC092634.1-201ENST00000366505 199 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 SNORD56.6-201ENST00000384569 71 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 RN7SKP16-201ENST00000410180 299 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 RN7SKP281-201ENST00000410472 352 ntBASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01558Q9Y6Z2 AC004552.1-201ENST00000419089 348 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms