Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 RNA5SP46-201ENST00000362370 120 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AC015983.1-201ENST00000441577 373 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 CUBNP2-201ENST00000443534 1139 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 DNAJB5P1-201ENST00000454004 806 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 SIAH1P1-201ENST00000479411 923 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AC022215.1-201ENST00000481770 362 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 OR51K1P-201ENST00000510214 950 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AL671862.1-201ENST00000515851 349 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 GARSP1-201ENST00000570895 719 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.09□□□□□ -1.12
NINLQ9Y2I6 OR11H2-202ENST00000641517 1085 ntBASIC8.09□□□□□ -1.12
NINLQ9Y2I6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 MRRFP1-201ENST00000435941 1675 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 LCOR-201ENST00000286067 4542 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 ZNF658B-201ENST00000602828 3408 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 SNORA64.1-201ENST00000362600 132 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 MRPL53P1-201ENST00000414323 319 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 TNPO1P1-201ENST00000423641 1138 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 AC108693.1-201ENST00000496068 432 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.08□□□□□ -1.12
NINLQ9Y2I6 MIR193BHG-214ENST00000641765 509 ntBASIC8.08□□□□□ -1.12
NINLQ9Y2I6 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 RAB28P1-201ENST00000411517 641 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AL596448.1-201ENST00000415024 392 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AL133445.1-201ENST00000467051 452 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AC099521.1-201ENST00000482557 334 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AC093267.1-201ENST00000489176 961 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AL049840.6-201ENST00000604583 345 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 ATM-229ENST00000639953 587 ntTSL 5 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 AC087565.3-203ENST00000641018 837 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
NINLQ9Y2I6 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.07□□□□□ -1.12
NINLQ9Y2I6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 AC010401.2-201ENST00000575137 4934 ntBASIC8.06□□□□□ -1.12
NINLQ9Y2I6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 HMGB1P20-201ENST00000402555 677 ntBASIC8.06□□□□□ -1.12
NINLQ9Y2I6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 RPL12P3-201ENST00000440080 396 ntBASIC8.06□□□□□ -1.12
NINLQ9Y2I6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.06□□□□□ -1.12
NINLQ9Y2I6 ACA64.4-201ENST00000459070 127 ntBASIC8.06□□□□□ -1.12
NINLQ9Y2I6 OR7E157P-201ENST00000494376 911 ntBASIC8.06□□□□□ -1.12
NINLQ9Y2I6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.06□□□□□ -1.12
NINLQ9Y2I6 IGBP1P1-201ENST00000554337 1009 ntBASIC8.06□□□□□ -1.12
NINLQ9Y2I6 MIR4260-201ENST00000583107 67 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms