Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 SNORD3G-201ENST00000362796 215 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RNU6-492P-201ENST00000363035 104 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RNA5SP145-201ENST00000363124 125 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.350-201ENST00000365409 98 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 CST13P-201ENST00000376992 428 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RNU6-1040P-201ENST00000383974 107 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 MIR514A2-201ENST00000385131 88 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 MIR514A3-201ENST00000385132 88 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 MIR296-201ENST00000385215 80 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AL360271.1-201ENST00000395679 510 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 MIR320C1-201ENST00000408566 88 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC109638.1-201ENST00000417406 326 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 PIGPP3-201ENST00000425307 415 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RPSAP8-201ENST00000429844 889 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 BX248409.1-201ENST00000455497 255 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RPL10P6-201ENST00000457497 318 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 TAAR3P-201ENST00000466706 1078 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC092451.1-201ENST00000480211 153 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 TAAR3P-202ENST00000481759 1025 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RN7SL65P-201ENST00000485221 315 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 OR4D12P-201ENST00000509361 911 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 RPL7P20-201ENST00000520308 745 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC023157.2-201ENST00000540596 141 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC084357.3-202ENST00000543539 679 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AL845552.1-201ENST00000556820 323 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC069061.3-201ENST00000582254 823 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AC106782.6-201ENST00000611264 512 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 OR1B1-201ENST00000623530 995 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AL162377.2-201ENST00000624532 337 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 EEF1A1P13-201ENST00000503537 1389 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 API5P2-201ENST00000397055 1498 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 FMO10P-201ENST00000455032 1493 ntBASIC8.31□□□□□ -1.08
LHX6Q9UPM6 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 MAPK10-386ENST00000642038 2354 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 NF1P9-201ENST00000629326 2008 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 AC051619.3-201ENST00000560646 2426 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 AC007614.6-201ENST00000623729 2620 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 RNU6-1097P-201ENST00000363586 107 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 RNA5SP69-201ENST00000364477 117 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.252-201ENST00000364556 101 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 RN7SKP47-201ENST00000365347 328 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 RNU6-996P-201ENST00000365438 107 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 RPLP1P10-201ENST00000413972 339 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 AC243428.1-201ENST00000421099 264 ntBASIC8.3□□□□□ -1.08
LHX6Q9UPM6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC8.3□□□□□ -1.08
LHX6Q9UPM6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms