Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC007956.1-201ENST00000555623 542 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 AP005119.1-201ENST00000580956 292 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 PSG10P-201ENST00000501199 1500 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AL162456.1-201ENST00000634535 2006 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC099677.3-201ENST00000427081 395 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 VTI1BP4-201ENST00000427516 527 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC110602.1-201ENST00000437414 318 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AL358876.1-201ENST00000453364 1075 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 RSU1P1-201ENST00000453416 441 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC023245.1-201ENST00000468501 517 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC090602.1-201ENST00000469695 252 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC111000.6-201ENST00000514471 709 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC090424.1-201ENST00000535243 736 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC079905.1-201ENST00000549280 475 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AC005244.1-201ENST00000582566 339 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 MIR6071-201ENST00000616741 78 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 AP000550.3-201ENST00000637734 379 ntBASIC5.52□□□□□ -1.53
COL21A1Q96P44 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
COL21A1Q96P44 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL21A1Q96P44 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 ADAM24P-201ENST00000398655 2101 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC004386.1-201ENST00000393214 761 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 RPS27AP6-201ENST00000427962 448 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC099670.2-201ENST00000435130 321 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AL663074.2-201ENST00000440621 479 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC073072.2-201ENST00000447425 348 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 RPL38P3-201ENST00000484463 213 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 PDCL3P4-201ENST00000489621 720 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC008629.2-201ENST00000503783 483 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 RNA5SP340-201ENST00000517132 107 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC078899.1-201ENST00000521432 1185 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 OR7E158P-201ENST00000524483 910 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 ZNF322P1-201ENST00000568013 1209 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC134669.1-201ENST00000581275 672 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms