Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SSXP3-201ENST00000442971 1300 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC018717.1-201ENST00000457712 1505 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 HSPD1P8-201ENST00000400121 1658 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 YWHAZP6-201ENST00000399764 738 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AL355143.1-201ENST00000407101 841 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 NPM1P26-201ENST00000426339 738 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC010240.2-201ENST00000445363 1205 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AL590004.3-202ENST00000445883 451 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 RN7SL254P-201ENST00000460609 284 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 EIF2S2P4-201ENST00000461070 984 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 RN7SL836P-201ENST00000476140 296 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC106822.1-201ENST00000502647 526 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC092349.1-201ENST00000504903 310 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 PCNAP1-201ENST00000505363 709 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AP001804.1-201ENST00000526868 919 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC016839.1-201ENST00000578162 867 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 SMIM12P1-201ENST00000603004 274 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC242628.1-201ENST00000606810 391 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AL355802.4-201ENST00000607635 548 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 AC110792.4-201ENST00000609843 298 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 RN7SL261P-201ENST00000613441 282 ntBASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP3Q96JB5 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC027575.3-201ENST00000583058 2747 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL121768.1-201ENST00000613917 2544 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 OR56A4-201ENST00000330728 1209 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL132875.1-201ENST00000403623 949 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 RN7SKP86-201ENST00000410454 332 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 RAB9AP4-201ENST00000415230 609 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL034379.1-201ENST00000423216 253 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 RNF19BPX-201ENST00000426224 625 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC009963.4-201ENST00000448535 339 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC012123.2-201ENST00000485809 248 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC108157.1-201ENST00000510511 539 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 TPM3P3-201ENST00000521343 354 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 OR4V1P-201ENST00000525394 1140 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC036111.2-201ENST00000533247 901 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 CKS1BP1-201ENST00000555221 240 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms