Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.44□□□□□ -1.22
DDX11Q96FC9 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.44□□□□□ -1.22
DDX11Q96FC9 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DDX11Q96FC9 AC119674.1-213ENST00000641177 1386 ntBASIC7.44□□□□□ -1.22
DDX11Q96FC9 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DDX11Q96FC9 AKAP17BP-201ENST00000431706 2719 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 GUCY1B2-204ENST00000531898 1979 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 RNA5SP350-201ENST00000363298 111 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL451142.1-201ENST00000375867 775 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 MIR323B-201ENST00000385269 82 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL139805.1-201ENST00000407837 289 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL354707.3-201ENST00000427308 331 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 MRPS21P3-201ENST00000436696 262 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 RN7SL165P-201ENST00000477476 291 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 METTL15P1-201ENST00000481421 1045 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC010627.1-201ENST00000503819 1294 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 RPEP1-201ENST00000504507 658 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 SNX18P25-201ENST00000510539 758 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC034205.1-201ENST00000520621 638 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL121652.1-201ENST00000608851 448 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL136097.3-201ENST00000611097 505 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC122108.2-201ENST00000611946 526 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC139792.2-201ENST00000624218 587 ntBASIC7.43□□□□□ -1.22
DDX11Q96FC9 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
DDX11Q96FC9 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.43□□□□□ -1.22
DDX11Q96FC9 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 MAPK10-287ENST00000641217 3037 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 AC010329.1-201ENST00000593903 8328 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 RNU6-1000P-201ENST00000391066 106 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AP003170.5-201ENST00000397185 335 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 UBE2V1P14-201ENST00000415815 558 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AC115285.1-201ENST00000424879 736 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 EMC3-AS1-205ENST00000438698 534 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 CXCR2P1-202ENST00000443392 1074 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AC010240.2-201ENST00000445363 1205 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 RN7SKP287-201ENST00000516546 266 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 COX6B1P4-201ENST00000519826 484 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 DUXAP3-201ENST00000603616 594 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 AL352984.2-201ENST00000611153 546 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AC074276.2-201ENST00000619891 348 ntBASIC7.42□□□□□ -1.22
DDX11Q96FC9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms