Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 RN7SL42P-201ENST00000579786 294 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC091488.1-201ENST00000604239 660 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC009135.2-201ENST00000624136 1768 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC008937.3-201ENST00000606813 1700 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC011379.1-201ENST00000508713 3025 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 RNA5SP378-201ENST00000363646 120 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 RN7SKP257-201ENST00000364525 309 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 RN7SKP50-201ENST00000364694 315 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MIR301B-201ENST00000390813 78 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 RPL5P35-201ENST00000398869 816 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MYO5BP3-201ENST00000431872 1279 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 SEPT7P5-201ENST00000434048 306 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 SUMO2P8-201ENST00000434672 286 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 OR52E7P-201ENST00000452394 933 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 Z82190.1-201ENST00000454534 490 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 FGF7P3-201ENST00000454645 303 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC107398.1-201ENST00000486904 505 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 SNORA19.2-201ENST00000516013 114 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC105029.1-201ENST00000520250 669 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC023080.1-201ENST00000551663 931 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 HIF1AP1-201ENST00000553642 175 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC010547.7-201ENST00000570323 333 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 MIR3171-201ENST00000584270 74 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC090699.1-201ENST00000586264 321 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC008737.2-201ENST00000599446 118 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC136443.5-201ENST00000603741 370 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC005790.1-201ENST00000619774 450 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC021106.3-201ENST00000623925 531 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AC079456.1-201ENST00000624010 480 ntBASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCUBE3Q8IX30 OR8B9P-202ENST00000642028 5216 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms