Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 ANP32BP1-202ENST00000568553 737 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 RN7SL270P-201ENST00000579643 281 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 NBR2-204ENST00000587322 63 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 MTND3P19-201ENST00000603825 345 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC005021.1-201ENST00000608730 355 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AL360219.1-201ENST00000610230 366 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 SNORA16A-202ENST00000628458 135 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 OR8B1P-202ENST00000641132 1178 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 OR8G3P-202ENST00000641572 1255 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 CYP2G2P-201ENST00000594920 1485 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC083806.2-201ENST00000617795 2685 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC112243.1-201ENST00000623949 3851 ntBASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM48Q8IWZ4 AC089998.1-201ENST00000548575 3141 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 RNA5SP321-201ENST00000362722 111 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 RNU1-24P-201ENST00000364285 165 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AL359694.1-201ENST00000403247 604 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 TRGV6-201ENST00000417928 299 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC096632.2-201ENST00000438139 1239 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC073648.4-201ENST00000442655 781 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 PTENP1-201ENST00000447117 1215 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC004890.1-201ENST00000461005 181 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AL157777.1-201ENST00000468100 304 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC099340.1-201ENST00000475247 599 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC079203.1-201ENST00000487972 404 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 RN7SL143P-201ENST00000496780 297 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC034244.1-201ENST00000507687 207 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 MRPS33P3-201ENST00000513456 322 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC117532.1-201ENST00000514638 323 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 RN7SKP248-201ENST00000516278 305 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC091304.4-201ENST00000565703 620 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 MIR212-201ENST00000586026 110 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AL035411.2-201ENST00000604022 421 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AP004372.1-201ENST00000604842 844 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC091768.1-201ENST00000609258 930 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC015922.4-201ENST00000612568 690 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 RMST_5.1-201ENST00000618704 126 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC123767.1-202ENST00000620407 817 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 FANCD2P2-201ENST00000437591 1400 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 PABPC1P8-201ENST00000452851 2086 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms