Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC021074.2-201ENST00000468434 172 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 RN7SL104P-201ENST00000498686 293 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 HMGB1P3-201ENST00000502802 616 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 IGKV1D-32-201ENST00000517449 318 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 HIGD1AP17-201ENST00000554576 276 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC093524.1-201ENST00000564266 1094 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 RPS7P1-201ENST00000571702 585 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC010463.3-201ENST00000594077 500 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AL159169.2-201ENST00000610061 1269 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC097505.1-201ENST00000610199 565 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC091544.5-201ENST00000620192 3815 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 Y_RNA.256-201ENST00000364594 104 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RNA5SP442-201ENST00000365050 107 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 Y_RNA.535-201ENST00000384612 99 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 VN1R12P-201ENST00000403778 876 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 TYMSP1-201ENST00000407851 869 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MIR1204-201ENST00000408388 67 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RN7SKP232-201ENST00000410170 290 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 CEACAMP8-201ENST00000413902 580 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC012498.1-201ENST00000424037 437 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MTCO1P45-201ENST00000431457 267 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RPL6P30-201ENST00000443382 862 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MTND4P19-201ENST00000446659 478 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RPL36AP55-201ENST00000454114 305 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC244505.3-201ENST00000454598 187 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RN7SL325P-201ENST00000460434 283 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC026348.1-201ENST00000462549 1053 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RN7SL797P-201ENST00000486314 297 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC139272.1-201ENST00000505516 640 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 LINC01085-203ENST00000511195 326 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 PGAM4P2-201ENST00000512491 721 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RNU6-506P-201ENST00000516553 94 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC106038.2-201ENST00000520706 568 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms