Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AL445665.1-202ENST00000452436 324 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AL358876.1-201ENST00000453364 1075 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 SNORA70.20-201ENST00000516848 126 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC078899.1-201ENST00000521432 1185 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 ZNF971P-201ENST00000562068 1249 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC096996.1-201ENST00000563813 325 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 RN7SL544P-201ENST00000617232 284 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 RN7SL763P-201ENST00000620922 284 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC110716.2-201ENST00000563865 3945 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 RNA5SP394-201ENST00000364216 119 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AL451142.1-201ENST00000375867 775 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 RPS3AP2-201ENST00000407190 754 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AK4P4-201ENST00000419465 646 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC073410.1-201ENST00000435125 589 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 OSTCP1-201ENST00000455507 450 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC073610.1-201ENST00000489971 396 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 IGKV3D-34-201ENST00000522638 302 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 OR4A46P-201ENST00000527255 933 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AL121594.2-201ENST00000541658 472 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC126615.2-201ENST00000553003 515 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC008521.2-201ENST00000591021 259 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC002044.3-201ENST00000623314 541 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC103703.1-201ENST00000634783 663 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 AC073342.2-201ENST00000595842 1800 ntBASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
BHLHA9Q7RTU4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AL513185.3-201ENST00000433335 1300 ntBASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 SNORA64.1-201ENST00000362600 132 ntBASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 HMGB1P20-201ENST00000402555 677 ntBASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AL390879.1-201ENST00000439143 386 ntBASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AP000281.1-201ENST00000444036 316 ntBASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 FRG2FP-204ENST00000453982 852 ntBASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 AL122001.1-201ENST00000457027 370 ntBASIC6.05□□□□□ -1.44
BHLHA9Q7RTU4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms