Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC004817.4-201ENST00000602396 3625 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 ABCA11P-202ENST00000504019 2110 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 ELOCP19-201ENST00000411919 318 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC021074.2-201ENST00000468434 172 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 MTND6P2-201ENST00000512226 524 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 UBE2FP2-201ENST00000566646 462 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 RN7SL356P-201ENST00000582228 248 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC137695.1-201ENST00000604126 489 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC112694.2-201ENST00000623697 768 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 MT-RNR2-201ENST00000387347 1559 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 SNORA62-201ENST00000365493 153 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 RN7SKP126-201ENST00000411143 300 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC090424.1-201ENST00000535243 736 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 AP000769.2-201ENST00000602344 396 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC079753.1-201ENST00000623243 3868 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 RPS3AP38-201ENST00000435889 763 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS13CQ709C8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 RNA5SP515-201ENST00000364570 118 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 RN7SKP253-201ENST00000516424 309 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 MLECP1-201ENST00000615893 709 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC092570.3-201ENST00000420113 693 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AL590399.4-201ENST00000436561 601 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 GTF2IP11-201ENST00000526931 420 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS13CQ709C8 TMPRSS4-218ENST00000534111 5550 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 RNA5SP326-201ENST00000363209 110 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC105384.2-201ENST00000508433 640 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC106730.2-201ENST00000566641 540 ntBASIC4.47□□□□□ -1.69
VPS13CQ709C8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS13CQ709C8 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS13CQ709C8 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
VPS13CQ709C8 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms