Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC003973.3-201ENST00000624863 2822 ntBASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC144BQ3MJ40 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 QRSL1P1-201ENST00000400977 1540 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 Z97989.1-201ENST00000531702 2421 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 RPL11P4-201ENST00000332269 436 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 RNA5SP65-201ENST00000363166 119 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 RNU4-31P-201ENST00000384211 141 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 MT-TP-201ENST00000387461 68 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 RPL22P22-201ENST00000395439 379 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC096537.2-201ENST00000413707 714 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 MTND4LP17-201ENST00000414607 293 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 HMGB3P10-201ENST00000434734 572 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 CRYGGP-201ENST00000443337 145 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 RPS26P41-201ENST00000450370 284 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 Z83838.1-202ENST00000456225 839 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 NDUFA5P5-201ENST00000468361 342 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 IGHV3-63-201ENST00000518422 341 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AP000916.1-201ENST00000533869 835 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC010735.1-201ENST00000567305 1026 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC026898.1-201ENST00000586404 571 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC018754.1-201ENST00000607486 925 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC084824.4-201ENST00000620106 731 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 AL590396.4-201ENST00000636779 956 ntBASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC144BQ3MJ40 SMG1P5-202ENST00000529428 4219 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 SMG1P2-201ENST00000566127 4221 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC006213.6-201ENST00000623722 4179 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 RNU6-481P-201ENST00000384194 107 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AL096711.1-201ENST00000404780 554 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 SNORA79B-201ENST00000410557 148 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 RN7SKP296-201ENST00000411185 341 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 PNRC2P1-201ENST00000423940 420 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 Z80107.1-201ENST00000436830 412 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC004854.1-201ENST00000440356 349 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC092824.1-201ENST00000483524 576 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 WDR78-207ENST00000488333 613 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 HAUS1P1-201ENST00000505275 832 ntBASIC7.47□□□□□ -1.21
CCDC144BQ3MJ40 AC069306.1-201ENST00000507006 843 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms