Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 RBMY2HP-201ENST00000457961 720 ntBASIC3.96□□□□□ -1.78
RPL39P62891 NXT1P1-201ENST00000458481 316 ntBASIC3.96□□□□□ -1.78
RPL39P62891 UBFD1P1-201ENST00000473259 814 ntBASIC3.96□□□□□ -1.78
RPL39P62891 H3F3AP5-201ENST00000475267 429 ntBASIC3.96□□□□□ -1.78
RPL39P62891 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 RN7SL502P-201ENST00000481857 290 ntBASIC3.96□□□□□ -1.78
RPL39P62891 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.96□□□□□ -1.78
RPL39P62891 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC3.96□□□□□ -1.78
RPL39P62891 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AC091078.2-201ENST00000557145 559 ntBASIC3.96□□□□□ -1.78
RPL39P62891 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AL359715.3-201ENST00000569267 2123 ntBASIC3.96□□□□□ -1.78
RPL39P62891 RN7SL290P-201ENST00000578661 300 ntBASIC3.96□□□□□ -1.78
RPL39P62891 MIR7853-201ENST00000584820 132 ntBASIC3.96□□□□□ -1.78
RPL39P62891 COX6CP7-201ENST00000597056 208 ntBASIC3.96□□□□□ -1.78
RPL39P62891 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AC092681.3-201ENST00000609463 678 ntBASIC3.96□□□□□ -1.78
RPL39P62891 AC008833.1-201ENST00000611633 691 ntBASIC3.96□□□□□ -1.78
RPL39P62891 GAPDHP41-201ENST00000613707 975 ntBASIC3.96□□□□□ -1.78
RPL39P62891 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL39P62891 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RPL39P62891 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.96□□□□□ -1.78
RPL39P62891 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 AC073136.1-201ENST00000449426 2884 ntBASIC3.96□□□□□ -1.78
RPL39P62891 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 PSG10P-201ENST00000501199 1500 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RPL39P62891 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
RPL39P62891 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 AL450345.1-202ENST00000605741 3881 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL39P62891 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL39P62891 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RPL39P62891 PSMA6P1-201ENST00000400275 741 ntBASIC3.95□□□□□ -1.78
RPL39P62891 HSD17B7P1-201ENST00000412419 1017 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL39P62891 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL39P62891 AC245291.3-201ENST00000443400 292 ntBASIC3.95□□□□□ -1.78
RPL39P62891 PPIAP7-201ENST00000454070 489 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AC099521.1-201ENST00000482557 334 ntBASIC3.95□□□□□ -1.78
RPL39P62891 ATP5LP5-201ENST00000483050 299 ntBASIC3.95□□□□□ -1.78
RPL39P62891 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL39P62891 AP002453.1-201ENST00000492327 668 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL39P62891 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 MORF4L2P1-201ENST00000503761 858 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL39P62891 RN7SKP253-201ENST00000516424 309 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AP000620.1-201ENST00000527147 504 ntBASIC3.95□□□□□ -1.78
RPL39P62891 OR5AM1P-201ENST00000532136 1032 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL39P62891 AC007346.1-201ENST00000569208 867 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 AC008507.3-201ENST00000585753 472 ntBASIC3.95□□□□□ -1.78
RPL39P62891 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL39P62891 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RPL39P62891 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 AL078621.3-201ENST00000623707 2042 ntBASIC3.95□□□□□ -1.78
RPL39P62891 ADAM5-202ENST00000399789 1942 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms