Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
CLDN6P56747 AC011504.1-201ENST00000623331 4103 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLDN6P56747 AC119674.1-213ENST00000641177 1386 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 AL049634.1-201ENST00000453770 1720 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 RNA5SP350-201ENST00000363298 111 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 RNU11-6P-201ENST00000391127 133 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 AC007568.1-201ENST00000422912 471 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 RPS7P3-201ENST00000443360 580 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 RANP1-206ENST00000455094 651 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 AC005532.2-201ENST00000467154 373 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLDN6P56747 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN6P56747 BX510359.5-201ENST00000515651 304 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLDN6P56747 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 RPA2P3-201ENST00000533268 770 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN6P56747 AL049872.1-201ENST00000556323 322 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN6P56747 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN6P56747 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 AC005840.5-201ENST00000619166 599 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 CU639417.4-201ENST00000623928 207 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN6P56747 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN6P56747 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CLDN6P56747 LINC02019-201ENST00000608605 2060 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLDN6P56747 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN6P56747 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN6P56747 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN6P56747 AC110373.1-201ENST00000505994 3505 ntBASIC5.68□□□□□ -1.5
CLDN6P56747 AC073365.1-203ENST00000641055 1992 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLDN6P56747 AP000641.1-201ENST00000531988 1639 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 AC016739.1-201ENST00000405359 345 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 OR2W4P-201ENST00000406496 926 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 CYP4F30P-202ENST00000420048 405 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 AL445928.1-201ENST00000435545 222 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 SPRYD7P1-201ENST00000443861 570 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN6P56747 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN6P56747 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.67□□□□□ -1.5
CLDN6P56747 AC115223.1-201ENST00000466377 870 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.67□□□□□ -1.5
CLDN6P56747 AC006499.3-201ENST00000506077 748 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 HIGD1AP14-201ENST00000507617 282 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN6P56747 RNU6-615P-201ENST00000516065 106 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 HMGB1P42-201ENST00000532126 553 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN6P56747 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 AL445649.1-201ENST00000615941 691 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 AC022919.1-201ENST00000624979 626 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CLDN6P56747 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLDN6P56747 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms