Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SLC1A1P43005 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC1A1P43005 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SLC1A1P43005 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SLC1A1P43005 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC1A1P43005 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC1A1P43005 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC1A1P43005 VN1R110P-201ENST00000438988 971 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 RPS23P2-201ENST00000463671 415 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 RN7SL197P-201ENST00000466981 299 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 AL122020.1-201ENST00000472287 459 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 AC044810.1-201ENST00000480271 711 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC1A1P43005 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC1A1P43005 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC1A1P43005 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC1A1P43005 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.04□□□□□ -1.44
SLC1A1P43005 MIR4502-201ENST00000580432 81 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 MIR4260-201ENST00000583107 67 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 AC108673.3-201ENST00000609183 335 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC1A1P43005 MIR6793-201ENST00000612376 63 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 CASC19-274ENST00000642018 970 ntBASIC6.04□□□□□ -1.44
SLC1A1P43005 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SLC1A1P43005 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC1A1P43005 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC1A1P43005 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC1A1P43005 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC1A1P43005 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SLC1A1P43005 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SLC1A1P43005 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.03□□□□□ -1.44
SLC1A1P43005 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC1A1P43005 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC1A1P43005 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC1A1P43005 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.03□□□□□ -1.44
SLC1A1P43005 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SLC1A1P43005 RNFT1P3-201ENST00000340898 1052 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 RN7SKP185-201ENST00000362813 326 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC1A1P43005 RN7SKP29-201ENST00000410957 272 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC1A1P43005 DPPA2P2-201ENST00000418220 897 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 RPL5P2-201ENST00000429598 854 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC1A1P43005 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 PPIAP27-201ENST00000453800 265 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 AC023194.2-201ENST00000465398 406 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.03□□□□□ -1.44
SLC1A1P43005 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC1A1P43005 HSD3BP3-201ENST00000514706 994 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.03□□□□□ -1.44
SLC1A1P43005 AC137627.1-201ENST00000545761 289 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 AC007956.1-201ENST00000555623 542 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SLC1A1P43005 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SLC1A1P43005 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC1A1P43005 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC1A1P43005 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SLC1A1P43005 AC125336.1-201ENST00000508893 2827 ntBASIC6.03□□□□□ -1.44
SLC1A1P43005 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.44
SLC1A1P43005 AC092451.3-201ENST00000625067 1343 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC1A1P43005 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC1A1P43005 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.02□□□□□ -1.45
SLC1A1P43005 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC1A1P43005 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC1A1P43005 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SLC1A1P43005 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC1A1P43005 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC1A1P43005 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.02□□□□□ -1.45
SLC1A1P43005 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC1A1P43005 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC1A1P43005 NPM1P25-201ENST00000429734 854 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC1A1P43005 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SLC1A1P43005 ATP5LP2-201ENST00000440646 311 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 TIMM8BP2-201ENST00000445940 251 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 AC093166.3-201ENST00000448785 303 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 AC108751.3-201ENST00000461814 1020 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 RN7SL57P-201ENST00000493687 290 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 RN7SKP238-201ENST00000516483 249 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC1A1P43005 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.02□□□□□ -1.45
SLC1A1P43005 AC139697.1-201ENST00000548429 745 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 AL356801.1-201ENST00000559320 294 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC1A1P43005 SETP3-201ENST00000581726 813 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC1A1P43005 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.02□□□□□ -1.45
SLC1A1P43005 AC018690.1-201ENST00000608144 626 ntBASIC6.02□□□□□ -1.45
SLC1A1P43005 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.02□□□□□ -1.45
SLC1A1P43005 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms