Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RFC5P40937 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFC5P40937 MTND4P23-201ENST00000447723 1363 ntBASIC8.35□□□□□ -1.07
RFC5P40937 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 AF131215.2-201ENST00000531549 1710 ntBASIC8.34□□□□□ -1.07
RFC5P40937 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 KYNUP3-201ENST00000574386 1341 ntBASIC8.34□□□□□ -1.07
RFC5P40937 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RFC5P40937 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 RNU5D-1-201ENST00000363299 116 ntBASIC8.34□□□□□ -1.07
RFC5P40937 SNORA72.1-201ENST00000363485 129 ntBASIC8.34□□□□□ -1.07
RFC5P40937 RNA5SP260-201ENST00000363849 111 ntBASIC8.34□□□□□ -1.07
RFC5P40937 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 RN7SKP225-201ENST00000410405 352 ntBASIC8.34□□□□□ -1.07
RFC5P40937 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 SNX18P13-201ENST00000412442 529 ntBASIC8.34□□□□□ -1.07
RFC5P40937 RPL17P12-201ENST00000413391 526 ntBASIC8.34□□□□□ -1.07
RFC5P40937 USP9YP6-201ENST00000413550 854 ntBASIC8.34□□□□□ -1.07
RFC5P40937 PPIAP30-201ENST00000415473 519 ntBASIC8.34□□□□□ -1.07
RFC5P40937 USP12PX-201ENST00000432383 1057 ntBASIC8.34□□□□□ -1.07
RFC5P40937 UBE2FP3-201ENST00000436366 524 ntBASIC8.34□□□□□ -1.07
RFC5P40937 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RFC5P40937 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.34□□□□□ -1.07
RFC5P40937 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 AC098824.1-201ENST00000453565 980 ntBASIC8.34□□□□□ -1.07
RFC5P40937 USP9YP34-201ENST00000453983 808 ntBASIC8.34□□□□□ -1.07
RFC5P40937 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RFC5P40937 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.34□□□□□ -1.07
RFC5P40937 RPL9P6-201ENST00000492764 598 ntBASIC8.34□□□□□ -1.07
RFC5P40937 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 AC008802.1-201ENST00000519121 791 ntBASIC8.34□□□□□ -1.07
RFC5P40937 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.34□□□□□ -1.07
RFC5P40937 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.34□□□□□ -1.07
RFC5P40937 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC8.34□□□□□ -1.07
RFC5P40937 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.34□□□□□ -1.07
RFC5P40937 FRG2IP-201ENST00000563581 781 ntBASIC8.34□□□□□ -1.07
RFC5P40937 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.34□□□□□ -1.07
RFC5P40937 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.34□□□□□ -1.07
RFC5P40937 AC112230.1-201ENST00000604342 547 ntBASIC8.34□□□□□ -1.07
RFC5P40937 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC8.34□□□□□ -1.07
RFC5P40937 pRNA.12-201ENST00000614353 90 ntBASIC8.34□□□□□ -1.07
RFC5P40937 pRNA.3-201ENST00000615048 90 ntBASIC8.34□□□□□ -1.07
RFC5P40937 AC243830.2-201ENST00000618067 630 ntBASIC8.34□□□□□ -1.07
RFC5P40937 AC009704.2-201ENST00000618739 483 ntBASIC8.34□□□□□ -1.07
RFC5P40937 DLST-216ENST00000626051 252 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 AC135352.1-201ENST00000506173 1418 ntBASIC8.34□□□□□ -1.07
RFC5P40937 AC092646.2-201ENST00000431242 2095 ntBASIC8.34□□□□□ -1.07
RFC5P40937 AC022306.1-201ENST00000560489 1562 ntBASIC8.34□□□□□ -1.07
RFC5P40937 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.34□□□□□ -1.07
RFC5P40937 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.34□□□□□ -1.07
RFC5P40937 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.34□□□□□ -1.07
RFC5P40937 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.34□□□□□ -1.07
RFC5P40937 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RFC5P40937 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.34□□□□□ -1.08
RFC5P40937 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
RFC5P40937 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
RFC5P40937 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.34□□□□□ -1.08
RFC5P40937 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFC5P40937 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFC5P40937 MAPK10-281ENST00000641170 3070 ntBASIC8.33□□□□□ -1.08
RFC5P40937 AC145138.1-201ENST00000512908 2851 ntBASIC8.33□□□□□ -1.08
RFC5P40937 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFC5P40937 AC009948.3-201ENST00000603415 1798 ntBASIC8.33□□□□□ -1.08
RFC5P40937 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFC5P40937 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.33□□□□□ -1.08
RFC5P40937 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.33□□□□□ -1.08
RFC5P40937 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.33□□□□□ -1.08
RFC5P40937 RBMX2P2-201ENST00000257020 946 ntBASIC8.33□□□□□ -1.08
RFC5P40937 AC103591.2-201ENST00000265259 766 ntBASIC8.33□□□□□ -1.08
RFC5P40937 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFC5P40937 OR56A4-201ENST00000330728 1209 ntBASIC8.33□□□□□ -1.08
RFC5P40937 RPL21P132-201ENST00000331267 462 ntBASIC8.33□□□□□ -1.08
RFC5P40937 RNU6-666P-201ENST00000363499 107 ntBASIC8.33□□□□□ -1.08
RFC5P40937 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RFC5P40937 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
RFC5P40937 AC003045.1-201ENST00000398779 713 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms