Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TM4SF1P30408 AC131971.1-201ENST00000332881 1482 ntBASIC7.15□□□□□ -1.27
TM4SF1P30408 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TM4SF1P30408 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
TM4SF1P30408 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TM4SF1P30408 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TM4SF1P30408 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TM4SF1P30408 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.15□□□□□ -1.27
TM4SF1P30408 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
TM4SF1P30408 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.15□□□□□ -1.27
TM4SF1P30408 NBPF8-201ENST00000583271 5330 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 RN7SKP279-201ENST00000411383 298 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 RPS26P13-201ENST00000419030 330 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 AL691447.1-201ENST00000419456 387 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.14□□□□□ -1.27
TM4SF1P30408 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 AC024451.1-201ENST00000508013 779 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 AC021733.2-201ENST00000518830 497 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 AC022832.1-201ENST00000530718 645 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.14□□□□□ -1.27
TM4SF1P30408 OR11J2P-201ENST00000555298 907 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.14□□□□□ -1.27
TM4SF1P30408 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 MIR4646-201ENST00000580775 63 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 AC067852.5-201ENST00000589299 310 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 AC004890.3-201ENST00000605566 1095 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 AC126915.2-201ENST00000610957 190 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 OR4G1P-202ENST00000641173 1788 ntBASIC7.14□□□□□ -1.27
TM4SF1P30408 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.14□□□□□ -1.27
TM4SF1P30408 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
TM4SF1P30408 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.14□□□□□ -1.27
TM4SF1P30408 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TM4SF1P30408 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.13□□□□□ -1.27
TM4SF1P30408 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TM4SF1P30408 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.13□□□□□ -1.27
TM4SF1P30408 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC7.13□□□□□ -1.27
TM4SF1P30408 RNA5SP335-201ENST00000363817 110 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 SNORD8-201ENST00000363915 110 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TM4SF1P30408 RNU1-106P-201ENST00000384382 164 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 AL645733.1-201ENST00000402250 217 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 TMA16P2-201ENST00000413187 601 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.13□□□□□ -1.27
TM4SF1P30408 AC006335.2-201ENST00000437993 330 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.13□□□□□ -1.27
TM4SF1P30408 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.13□□□□□ -1.27
TM4SF1P30408 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.13□□□□□ -1.27
TM4SF1P30408 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.13□□□□□ -1.27
TM4SF1P30408 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.13□□□□□ -1.27
TM4SF1P30408 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.13□□□□□ -1.27
TM4SF1P30408 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 RN7SKP66-201ENST00000516681 231 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.13□□□□□ -1.27
TM4SF1P30408 AC012616.1-201ENST00000600294 197 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 AL118522.2-201ENST00000616045 615 ntBASIC7.13□□□□□ -1.27
TM4SF1P30408 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.13□□□□□ -1.27
TM4SF1P30408 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TM4SF1P30408 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
TM4SF1P30408 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TM4SF1P30408 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.12□□□□□ -1.27
TM4SF1P30408 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.12□□□□□ -1.27
TM4SF1P30408 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.12□□□□□ -1.27
TM4SF1P30408 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
TM4SF1P30408 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 AL589647.1-201ENST00000402485 466 ntBASIC7.12□□□□□ -1.27
TM4SF1P30408 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.12□□□□□ -1.27
TM4SF1P30408 AL731534.1-201ENST00000434711 269 ntBASIC7.12□□□□□ -1.27
TM4SF1P30408 RPS23P9-201ENST00000448848 438 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms